Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
CD248Q9HCU0 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CD248Q9HCU0 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CD248Q9HCU0 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC15.5■□□□□ 0.07
CD248Q9HCU0 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CD248Q9HCU0 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC15.5■□□□□ 0.07
CD248Q9HCU0 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC15.5■□□□□ 0.07
CD248Q9HCU0 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CD248Q9HCU0 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CD248Q9HCU0 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CD248Q9HCU0 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CD248Q9HCU0 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC15.5■□□□□ 0.07
CD248Q9HCU0 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.5■□□□□ 0.07
CD248Q9HCU0 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CD248Q9HCU0 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CD248Q9HCU0 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CD248Q9HCU0 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC15.49■□□□□ 0.07
CD248Q9HCU0 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CD248Q9HCU0 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CD248Q9HCU0 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CD248Q9HCU0 AL023775.1-201ENST00000454907 1746 ntBASIC15.49■□□□□ 0.07
CD248Q9HCU0 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CD248Q9HCU0 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CD248Q9HCU0 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CD248Q9HCU0 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CD248Q9HCU0 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CD248Q9HCU0 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CD248Q9HCU0 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CD248Q9HCU0 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CD248Q9HCU0 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.49■□□□□ 0.07
CD248Q9HCU0 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CD248Q9HCU0 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CD248Q9HCU0 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CD248Q9HCU0 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC15.49■□□□□ 0.07
CD248Q9HCU0 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CD248Q9HCU0 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
CD248Q9HCU0 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
CD248Q9HCU0 NUS1P3-201ENST00000423502 862 ntBASIC15.49■□□□□ 0.07
CD248Q9HCU0 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC15.49■□□□□ 0.07
CD248Q9HCU0 AC245100.3-201ENST00000441281 285 ntBASIC15.49■□□□□ 0.07
CD248Q9HCU0 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC15.49■□□□□ 0.07
CD248Q9HCU0 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CD248Q9HCU0 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.49■□□□□ 0.07
CD248Q9HCU0 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC15.49■□□□□ 0.07
CD248Q9HCU0 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
CD248Q9HCU0 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CD248Q9HCU0 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CD248Q9HCU0 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC15.49■□□□□ 0.07
CD248Q9HCU0 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
CD248Q9HCU0 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
CD248Q9HCU0 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC15.49■□□□□ 0.07
CD248Q9HCU0 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CD248Q9HCU0 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CD248Q9HCU0 AC007787.1-201ENST00000588095 1583 ntBASIC15.49■□□□□ 0.07
CD248Q9HCU0 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
CD248Q9HCU0 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CD248Q9HCU0 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.48■□□□□ 0.07
CD248Q9HCU0 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CD248Q9HCU0 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.48■□□□□ 0.07
CD248Q9HCU0 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
CD248Q9HCU0 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.48■□□□□ 0.07
CD248Q9HCU0 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CD248Q9HCU0 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CD248Q9HCU0 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC15.48■□□□□ 0.07
CD248Q9HCU0 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CD248Q9HCU0 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CD248Q9HCU0 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC15.48■□□□□ 0.07
CD248Q9HCU0 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CD248Q9HCU0 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CD248Q9HCU0 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
CD248Q9HCU0 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CD248Q9HCU0 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CD248Q9HCU0 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.48■□□□□ 0.07
CD248Q9HCU0 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
CD248Q9HCU0 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CD248Q9HCU0 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CD248Q9HCU0 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CD248Q9HCU0 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CD248Q9HCU0 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CD248Q9HCU0 AL139094.1-201ENST00000405549 1188 ntBASIC15.48■□□□□ 0.07
CD248Q9HCU0 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CD248Q9HCU0 HOMER2P2-201ENST00000451621 847 ntBASIC15.48■□□□□ 0.07
CD248Q9HCU0 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.48■□□□□ 0.07
CD248Q9HCU0 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CD248Q9HCU0 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC15.48■□□□□ 0.07
CD248Q9HCU0 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC15.48■□□□□ 0.07
CD248Q9HCU0 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC15.48■□□□□ 0.07
CD248Q9HCU0 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC15.48■□□□□ 0.07
CD248Q9HCU0 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC15.48■□□□□ 0.07
CD248Q9HCU0 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC15.48■□□□□ 0.07
CD248Q9HCU0 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC15.48■□□□□ 0.07
CD248Q9HCU0 EEF1DP1-201ENST00000585891 896 ntBASIC15.48■□□□□ 0.07
CD248Q9HCU0 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC15.48■□□□□ 0.07
CD248Q9HCU0 SRC-202ENST00000373558 4304 ntTSL 5 BASIC15.48■□□□□ 0.07
CD248Q9HCU0 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC15.48■□□□□ 0.07
CD248Q9HCU0 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
CD248Q9HCU0 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CD248Q9HCU0 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
CD248Q9HCU0 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CD248Q9HCU0 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms