Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC9.87□□□□□ -0.83
SND1-IT1Q9HBX3 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC9.87□□□□□ -0.83
SND1-IT1Q9HBX3 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC9.87□□□□□ -0.83
SND1-IT1Q9HBX3 CCND1-203ENST00000536559 553 ntTSL 3 BASIC9.87□□□□□ -0.83
SND1-IT1Q9HBX3 AC093520.2-201ENST00000561830 333 ntBASIC9.87□□□□□ -0.83
SND1-IT1Q9HBX3 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC9.87□□□□□ -0.83
SND1-IT1Q9HBX3 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC9.87□□□□□ -0.83
SND1-IT1Q9HBX3 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC9.87□□□□□ -0.83
SND1-IT1Q9HBX3 AL513210.1-201ENST00000629608 234 ntBASIC9.87□□□□□ -0.83
SND1-IT1Q9HBX3 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
SND1-IT1Q9HBX3 PRKCE-201ENST00000306156 5650 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
SND1-IT1Q9HBX3 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC9.87□□□□□ -0.83
SND1-IT1Q9HBX3 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
SND1-IT1Q9HBX3 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
SND1-IT1Q9HBX3 AL139385.1-201ENST00000611744 3272 ntBASIC9.87□□□□□ -0.83
SND1-IT1Q9HBX3 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC9.87□□□□□ -0.83
SND1-IT1Q9HBX3 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC9.87□□□□□ -0.83
SND1-IT1Q9HBX3 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
SND1-IT1Q9HBX3 SPICE1-201ENST00000295872 5417 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
SND1-IT1Q9HBX3 QSOX1-202ENST00000367602 9311 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
SND1-IT1Q9HBX3 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
SND1-IT1Q9HBX3 MYO1D-202ENST00000394649 5451 ntTSL 5 BASIC9.87□□□□□ -0.83
SND1-IT1Q9HBX3 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
SND1-IT1Q9HBX3 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC9.87□□□□□ -0.83
SND1-IT1Q9HBX3 CICP16-201ENST00000502609 2813 ntBASIC9.87□□□□□ -0.83
SND1-IT1Q9HBX3 FOXK1-201ENST00000328914 11181 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
SND1-IT1Q9HBX3 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
SND1-IT1Q9HBX3 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC9.87□□□□□ -0.83
SND1-IT1Q9HBX3 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
SND1-IT1Q9HBX3 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
SND1-IT1Q9HBX3 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC9.87□□□□□ -0.83
SND1-IT1Q9HBX3 MTMR2-201ENST00000346299 4681 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
SND1-IT1Q9HBX3 MTMR2-203ENST00000393223 4681 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
SND1-IT1Q9HBX3 DYSF-206ENST00000409744 6564 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
SND1-IT1Q9HBX3 DYSF-209ENST00000410041 6594 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
SND1-IT1Q9HBX3 SCN8A-209ENST00000627620 5943 ntAPPRIS ALT1 TSL 5 BASIC9.86□□□□□ -0.83
SND1-IT1Q9HBX3 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC9.86□□□□□ -0.83
SND1-IT1Q9HBX3 API5-203ENST00000455725 2257 ntTSL 2 BASIC9.86□□□□□ -0.83
SND1-IT1Q9HBX3 AC004241.5-201ENST00000623870 2448 ntBASIC9.86□□□□□ -0.83
SND1-IT1Q9HBX3 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC9.86□□□□□ -0.83
SND1-IT1Q9HBX3 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
SND1-IT1Q9HBX3 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
SND1-IT1Q9HBX3 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
SND1-IT1Q9HBX3 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC9.86□□□□□ -0.83
SND1-IT1Q9HBX3 MAP4K2-201ENST00000294066 7178 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
SND1-IT1Q9HBX3 AC083964.2-201ENST00000623988 2396 ntBASIC9.86□□□□□ -0.83
SND1-IT1Q9HBX3 TBL1X-203ENST00000407597 5596 ntTSL 2 BASIC9.86□□□□□ -0.83
SND1-IT1Q9HBX3 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
SND1-IT1Q9HBX3 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
SND1-IT1Q9HBX3 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
SND1-IT1Q9HBX3 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
SND1-IT1Q9HBX3 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
SND1-IT1Q9HBX3 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
SND1-IT1Q9HBX3 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
SND1-IT1Q9HBX3 NCBP1-202ENST00000375147 5178 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
SND1-IT1Q9HBX3 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
SND1-IT1Q9HBX3 AC004461.1-201ENST00000412461 403 ntBASIC9.86□□□□□ -0.83
SND1-IT1Q9HBX3 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC9.86□□□□□ -0.83
SND1-IT1Q9HBX3 SPDYE7P-202ENST00000420373 878 ntBASIC9.86□□□□□ -0.83
SND1-IT1Q9HBX3 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC9.86□□□□□ -0.83
SND1-IT1Q9HBX3 AL122018.1-201ENST00000446607 2310 ntBASIC9.86□□□□□ -0.83
SND1-IT1Q9HBX3 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC9.86□□□□□ -0.83
SND1-IT1Q9HBX3 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC9.86□□□□□ -0.83
SND1-IT1Q9HBX3 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC9.86□□□□□ -0.83
SND1-IT1Q9HBX3 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
SND1-IT1Q9HBX3 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
SND1-IT1Q9HBX3 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC9.86□□□□□ -0.83
SND1-IT1Q9HBX3 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC9.86□□□□□ -0.83
SND1-IT1Q9HBX3 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
SND1-IT1Q9HBX3 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC9.86□□□□□ -0.83
SND1-IT1Q9HBX3 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC9.86□□□□□ -0.83
SND1-IT1Q9HBX3 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC9.86□□□□□ -0.83
SND1-IT1Q9HBX3 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC9.86□□□□□ -0.83
SND1-IT1Q9HBX3 NME4-212ENST00000621774 904 ntTSL 3 BASIC9.86□□□□□ -0.83
SND1-IT1Q9HBX3 RAB34-224ENST00000636513 888 ntTSL 5 BASIC9.86□□□□□ -0.83
SND1-IT1Q9HBX3 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
SND1-IT1Q9HBX3 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
SND1-IT1Q9HBX3 AC068760.1-201ENST00000493579 1953 ntBASIC9.86□□□□□ -0.83
SND1-IT1Q9HBX3 RIMS1-201ENST00000264839 7055 ntTSL 5 BASIC9.86□□□□□ -0.83
SND1-IT1Q9HBX3 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
SND1-IT1Q9HBX3 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
SND1-IT1Q9HBX3 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC9.86□□□□□ -0.83
SND1-IT1Q9HBX3 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
SND1-IT1Q9HBX3 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
SND1-IT1Q9HBX3 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC9.86□□□□□ -0.83
SND1-IT1Q9HBX3 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
SND1-IT1Q9HBX3 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
SND1-IT1Q9HBX3 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
SND1-IT1Q9HBX3 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
SND1-IT1Q9HBX3 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC9.86□□□□□ -0.83
SND1-IT1Q9HBX3 ZNF398-201ENST00000426851 5268 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
SND1-IT1Q9HBX3 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC9.86□□□□□ -0.83
SND1-IT1Q9HBX3 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
SND1-IT1Q9HBX3 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
SND1-IT1Q9HBX3 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
SND1-IT1Q9HBX3 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
SND1-IT1Q9HBX3 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC9.86□□□□□ -0.83
SND1-IT1Q9HBX3 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC9.86□□□□□ -0.83
SND1-IT1Q9HBX3 RN7SL832P-201ENST00000607781 1756 ntBASIC9.86□□□□□ -0.83
SND1-IT1Q9HBX3 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC9.86□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms