Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
UPF3BQ9BZI7 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC17.5■□□□□ 0.39
UPF3BQ9BZI7 AC008735.3-201ENST00000596646 500 ntBASIC17.5■□□□□ 0.39
UPF3BQ9BZI7 OR10B1P-201ENST00000601666 907 ntBASIC17.5■□□□□ 0.39
UPF3BQ9BZI7 AC244669.2-201ENST00000612320 853 ntBASIC17.5■□□□□ 0.39
UPF3BQ9BZI7 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
UPF3BQ9BZI7 AL591163.1-201ENST00000641757 987 ntBASIC17.5■□□□□ 0.39
UPF3BQ9BZI7 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
UPF3BQ9BZI7 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UPF3BQ9BZI7 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
UPF3BQ9BZI7 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UPF3BQ9BZI7 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC17.5■□□□□ 0.39
UPF3BQ9BZI7 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
UPF3BQ9BZI7 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UPF3BQ9BZI7 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC17.5■□□□□ 0.39
UPF3BQ9BZI7 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
UPF3BQ9BZI7 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
UPF3BQ9BZI7 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UPF3BQ9BZI7 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC17.5■□□□□ 0.39
UPF3BQ9BZI7 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC17.5■□□□□ 0.39
UPF3BQ9BZI7 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
UPF3BQ9BZI7 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
UPF3BQ9BZI7 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
UPF3BQ9BZI7 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC17.5■□□□□ 0.39
UPF3BQ9BZI7 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
UPF3BQ9BZI7 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UPF3BQ9BZI7 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UPF3BQ9BZI7 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UPF3BQ9BZI7 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC17.49■□□□□ 0.39
UPF3BQ9BZI7 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UPF3BQ9BZI7 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
UPF3BQ9BZI7 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UPF3BQ9BZI7 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC17.49■□□□□ 0.39
UPF3BQ9BZI7 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UPF3BQ9BZI7 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UPF3BQ9BZI7 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UPF3BQ9BZI7 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
UPF3BQ9BZI7 GUK1-206ENST00000366723 845 ntTSL 5 BASIC17.49■□□□□ 0.39
UPF3BQ9BZI7 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC17.49■□□□□ 0.39
UPF3BQ9BZI7 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
UPF3BQ9BZI7 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
UPF3BQ9BZI7 AC005229.1-201ENST00000392885 409 ntBASIC17.49■□□□□ 0.39
UPF3BQ9BZI7 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UPF3BQ9BZI7 FAM197Y7-201ENST00000432892 766 ntBASIC17.49■□□□□ 0.39
UPF3BQ9BZI7 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC17.49■□□□□ 0.39
UPF3BQ9BZI7 PUDPP3-201ENST00000445368 636 ntBASIC17.49■□□□□ 0.39
UPF3BQ9BZI7 AC007389.4-201ENST00000454674 793 ntBASIC17.49■□□□□ 0.39
UPF3BQ9BZI7 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC17.49■□□□□ 0.39
UPF3BQ9BZI7 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC17.49■□□□□ 0.39
UPF3BQ9BZI7 FAM8A2P-201ENST00000528813 1142 ntBASIC17.49■□□□□ 0.39
UPF3BQ9BZI7 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC17.49■□□□□ 0.39
UPF3BQ9BZI7 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC17.49■□□□□ 0.39
UPF3BQ9BZI7 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC17.49■□□□□ 0.39
UPF3BQ9BZI7 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC17.49■□□□□ 0.39
UPF3BQ9BZI7 PIGL-212ENST00000581006 554 ntTSL 4 BASIC17.49■□□□□ 0.39
UPF3BQ9BZI7 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC17.49■□□□□ 0.39
UPF3BQ9BZI7 MIR6074-201ENST00000612054 107 ntBASIC17.49■□□□□ 0.39
UPF3BQ9BZI7 IGHV3-72-202ENST00000621503 303 ntBASIC17.49■□□□□ 0.39
UPF3BQ9BZI7 SNX12-206ENST00000622259 661 ntTSL 5 BASIC17.49■□□□□ 0.39
UPF3BQ9BZI7 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
UPF3BQ9BZI7 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UPF3BQ9BZI7 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UPF3BQ9BZI7 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
UPF3BQ9BZI7 HPD-204ENST00000543163 1709 ntTSL 5 BASIC17.49■□□□□ 0.39
UPF3BQ9BZI7 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UPF3BQ9BZI7 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
UPF3BQ9BZI7 MAPT-IT1-201ENST00000624111 3016 ntBASIC17.49■□□□□ 0.39
UPF3BQ9BZI7 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
UPF3BQ9BZI7 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UPF3BQ9BZI7 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UPF3BQ9BZI7 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UPF3BQ9BZI7 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
UPF3BQ9BZI7 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UPF3BQ9BZI7 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UPF3BQ9BZI7 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
UPF3BQ9BZI7 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
UPF3BQ9BZI7 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC17.48■□□□□ 0.39
UPF3BQ9BZI7 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
UPF3BQ9BZI7 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
UPF3BQ9BZI7 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
UPF3BQ9BZI7 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UPF3BQ9BZI7 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC17.48■□□□□ 0.39
UPF3BQ9BZI7 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC17.48■□□□□ 0.39
UPF3BQ9BZI7 AC132938.4-201ENST00000623835 848 ntBASIC17.48■□□□□ 0.39
UPF3BQ9BZI7 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UPF3BQ9BZI7 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
UPF3BQ9BZI7 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UPF3BQ9BZI7 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
UPF3BQ9BZI7 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UPF3BQ9BZI7 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UPF3BQ9BZI7 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
UPF3BQ9BZI7 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
UPF3BQ9BZI7 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC17.48■□□□□ 0.39
UPF3BQ9BZI7 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
UPF3BQ9BZI7 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UPF3BQ9BZI7 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
UPF3BQ9BZI7 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
UPF3BQ9BZI7 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
UPF3BQ9BZI7 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
UPF3BQ9BZI7 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms