Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC14.32□□□□□ -0.12
COL25A1Q9BXS0 RNF141-202ENST00000528665 1374 ntTSL 2 BASIC14.32□□□□□ -0.12
COL25A1Q9BXS0 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
COL25A1Q9BXS0 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
COL25A1Q9BXS0 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
COL25A1Q9BXS0 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC14.31□□□□□ -0.12
COL25A1Q9BXS0 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
COL25A1Q9BXS0 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
COL25A1Q9BXS0 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
COL25A1Q9BXS0 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
COL25A1Q9BXS0 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.31□□□□□ -0.12
COL25A1Q9BXS0 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
COL25A1Q9BXS0 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
COL25A1Q9BXS0 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
COL25A1Q9BXS0 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
COL25A1Q9BXS0 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
COL25A1Q9BXS0 U3.5-201ENST00000363448 216 ntBASIC14.31□□□□□ -0.12
COL25A1Q9BXS0 TFAM-201ENST00000373895 973 ntTSL 2 BASIC14.31□□□□□ -0.12
COL25A1Q9BXS0 ATP6V1G1-201ENST00000374050 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
COL25A1Q9BXS0 NAA10-205ENST00000393712 908 ntTSL 5 BASIC14.31□□□□□ -0.12
COL25A1Q9BXS0 AC012497.1-201ENST00000429392 575 ntBASIC14.31□□□□□ -0.12
COL25A1Q9BXS0 ZBTB46-AS1-201ENST00000435912 533 ntTSL 3 BASIC14.31□□□□□ -0.12
COL25A1Q9BXS0 BX284656.1-201ENST00000446364 668 ntTSL 3 BASIC14.31□□□□□ -0.12
COL25A1Q9BXS0 AC118758.1-201ENST00000448242 564 ntTSL 4 BASIC14.31□□□□□ -0.12
COL25A1Q9BXS0 AC008267.3-201ENST00000448776 712 ntBASIC14.31□□□□□ -0.12
COL25A1Q9BXS0 AC015818.1-201ENST00000451011 244 ntBASIC14.31□□□□□ -0.12
COL25A1Q9BXS0 MYCBP-203ENST00000494695 750 ntTSL 2 BASIC14.31□□□□□ -0.12
COL25A1Q9BXS0 EFNA5-204ENST00000509503 637 ntTSL 5 BASIC14.31□□□□□ -0.12
COL25A1Q9BXS0 KRTAP2-2-202ENST00000542910 390 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
COL25A1Q9BXS0 RBM7-208ENST00000545678 867 ntTSL 3 BASIC14.31□□□□□ -0.12
COL25A1Q9BXS0 AC046168.2-202ENST00000561123 926 ntTSL 3 BASIC14.31□□□□□ -0.12
COL25A1Q9BXS0 AC021439.1-201ENST00000562975 591 ntTSL 4 BASIC14.31□□□□□ -0.12
COL25A1Q9BXS0 AP001180.4-201ENST00000584167 823 ntTSL 3 BASIC14.31□□□□□ -0.12
COL25A1Q9BXS0 CALM3-206ENST00000594523 540 ntTSL 4 BASIC14.31□□□□□ -0.12
COL25A1Q9BXS0 ZNF677-207ENST00000598806 701 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
COL25A1Q9BXS0 AL603832.3-203ENST00000606505 813 ntAPPRIS P5 TSL 5 BASIC14.31□□□□□ -0.12
COL25A1Q9BXS0 AC090386.2-201ENST00000623010 1039 ntBASIC14.31□□□□□ -0.12
COL25A1Q9BXS0 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC14.31□□□□□ -0.12
COL25A1Q9BXS0 PUF60-204ENST00000456095 1736 ntTSL 5 BASIC14.31□□□□□ -0.12
COL25A1Q9BXS0 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
COL25A1Q9BXS0 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
COL25A1Q9BXS0 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
COL25A1Q9BXS0 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.31□□□□□ -0.12
COL25A1Q9BXS0 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
COL25A1Q9BXS0 MPZL3-204ENST00000527472 1381 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
COL25A1Q9BXS0 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
COL25A1Q9BXS0 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
COL25A1Q9BXS0 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.31□□□□□ -0.12
COL25A1Q9BXS0 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
COL25A1Q9BXS0 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC14.3□□□□□ -0.12
COL25A1Q9BXS0 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
COL25A1Q9BXS0 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC14.3□□□□□ -0.12
COL25A1Q9BXS0 TMUB2-205ENST00000587172 1598 ntTSL 2 BASIC14.3□□□□□ -0.12
COL25A1Q9BXS0 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.3□□□□□ -0.12
COL25A1Q9BXS0 AC023509.3-202ENST00000591834 1609 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
COL25A1Q9BXS0 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
COL25A1Q9BXS0 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
COL25A1Q9BXS0 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
COL25A1Q9BXS0 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC14.3□□□□□ -0.12
COL25A1Q9BXS0 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COL25A1Q9BXS0 MCOLN3-201ENST00000341115 1762 ntTSL 2 BASIC14.3□□□□□ -0.12
COL25A1Q9BXS0 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COL25A1Q9BXS0 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
COL25A1Q9BXS0 SLIRP-201ENST00000238688 394 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
COL25A1Q9BXS0 OR6M1-201ENST00000309154 1053 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
COL25A1Q9BXS0 OR52N1-201ENST00000317078 963 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
COL25A1Q9BXS0 OR6N1-201ENST00000335094 1027 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
COL25A1Q9BXS0 ABCA1-201ENST00000374733 923 ntTSL 2 BASIC14.3□□□□□ -0.12
COL25A1Q9BXS0 OR7E155P-201ENST00000412208 1014 ntBASIC14.3□□□□□ -0.12
COL25A1Q9BXS0 HNRNPA1P68-201ENST00000425806 979 ntBASIC14.3□□□□□ -0.12
COL25A1Q9BXS0 OR2A15P-201ENST00000463814 900 ntBASIC14.3□□□□□ -0.12
COL25A1Q9BXS0 YBX1P3-201ENST00000468366 909 ntBASIC14.3□□□□□ -0.12
COL25A1Q9BXS0 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC14.3□□□□□ -0.12
COL25A1Q9BXS0 AC067942.2-201ENST00000506227 1268 ntBASIC14.3□□□□□ -0.12
COL25A1Q9BXS0 DNM1P17-201ENST00000512082 426 ntBASIC14.3□□□□□ -0.12
COL25A1Q9BXS0 MNAT1-202ENST00000539616 1220 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
COL25A1Q9BXS0 PHBP18-201ENST00000546648 813 ntBASIC14.3□□□□□ -0.12
COL25A1Q9BXS0 AC090907.2-201ENST00000559857 720 ntTSL 3 BASIC14.3□□□□□ -0.12
COL25A1Q9BXS0 AL390728.6-201ENST00000566446 1246 ntBASIC14.3□□□□□ -0.12
COL25A1Q9BXS0 Z92544.2-202ENST00000566927 407 ntTSL 3 BASIC14.3□□□□□ -0.12
COL25A1Q9BXS0 PIMREG-209ENST00000576056 833 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
COL25A1Q9BXS0 SMIM6-202ENST00000579469 957 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COL25A1Q9BXS0 SOX2-OT-228ENST00000597828 864 ntTSL 5 BASIC14.3□□□□□ -0.12
COL25A1Q9BXS0 AC013472.3-201ENST00000607407 659 ntBASIC14.3□□□□□ -0.12
COL25A1Q9BXS0 CFTRP2-201ENST00000634304 199 ntBASIC14.3□□□□□ -0.12
COL25A1Q9BXS0 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
COL25A1Q9BXS0 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
COL25A1Q9BXS0 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
COL25A1Q9BXS0 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.3□□□□□ -0.12
COL25A1Q9BXS0 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
COL25A1Q9BXS0 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COL25A1Q9BXS0 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC14.3□□□□□ -0.12
COL25A1Q9BXS0 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC14.3□□□□□ -0.12
COL25A1Q9BXS0 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COL25A1Q9BXS0 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
COL25A1Q9BXS0 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
COL25A1Q9BXS0 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC14.3□□□□□ -0.12
COL25A1Q9BXS0 SALL4P6-201ENST00000429385 1691 ntBASIC14.3□□□□□ -0.12
COL25A1Q9BXS0 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC14.3□□□□□ -0.12
COL25A1Q9BXS0 TMEM74B-201ENST00000381894 1730 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms