Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
SSBP3Q9BWW4 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
SSBP3Q9BWW4 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SSBP3Q9BWW4 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
SSBP3Q9BWW4 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SSBP3Q9BWW4 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
SSBP3Q9BWW4 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC12.27□□□□□ -0.45
SSBP3Q9BWW4 AC092135.3-201ENST00000624151 1846 ntBASIC12.27□□□□□ -0.45
SSBP3Q9BWW4 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SSBP3Q9BWW4 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.45
SSBP3Q9BWW4 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
SSBP3Q9BWW4 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SSBP3Q9BWW4 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SSBP3Q9BWW4 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SSBP3Q9BWW4 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SSBP3Q9BWW4 AC005840.4-201ENST00000541242 2494 ntBASIC12.27□□□□□ -0.45
SSBP3Q9BWW4 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SSBP3Q9BWW4 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SSBP3Q9BWW4 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SSBP3Q9BWW4 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
SSBP3Q9BWW4 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSBP3Q9BWW4 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SSBP3Q9BWW4 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC12.26□□□□□ -0.45
SSBP3Q9BWW4 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
SSBP3Q9BWW4 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSBP3Q9BWW4 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSBP3Q9BWW4 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SSBP3Q9BWW4 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSBP3Q9BWW4 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSBP3Q9BWW4 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SSBP3Q9BWW4 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC12.26□□□□□ -0.45
SSBP3Q9BWW4 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSBP3Q9BWW4 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSBP3Q9BWW4 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC12.26□□□□□ -0.45
SSBP3Q9BWW4 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSBP3Q9BWW4 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSBP3Q9BWW4 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC12.26□□□□□ -0.45
SSBP3Q9BWW4 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SSBP3Q9BWW4 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSBP3Q9BWW4 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSBP3Q9BWW4 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
SSBP3Q9BWW4 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSBP3Q9BWW4 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC12.26□□□□□ -0.45
SSBP3Q9BWW4 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSBP3Q9BWW4 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
SSBP3Q9BWW4 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSBP3Q9BWW4 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC12.26□□□□□ -0.45
SSBP3Q9BWW4 SMS-201ENST00000379404 1174 ntTSL 3 BASIC12.26□□□□□ -0.45
SSBP3Q9BWW4 RNMTL1P1-201ENST00000454103 560 ntBASIC12.26□□□□□ -0.45
SSBP3Q9BWW4 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC12.26□□□□□ -0.45
SSBP3Q9BWW4 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC12.26□□□□□ -0.45
SSBP3Q9BWW4 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC12.26□□□□□ -0.45
SSBP3Q9BWW4 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC12.26□□□□□ -0.45
SSBP3Q9BWW4 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SSBP3Q9BWW4 KC6-205ENST00000599934 556 ntTSL 4 BASIC12.26□□□□□ -0.45
SSBP3Q9BWW4 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SSBP3Q9BWW4 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC12.26□□□□□ -0.45
SSBP3Q9BWW4 AC138649.2-201ENST00000615886 705 ntBASIC12.26□□□□□ -0.45
SSBP3Q9BWW4 AL136295.7-201ENST00000619226 1200 ntBASIC12.26□□□□□ -0.45
SSBP3Q9BWW4 AC027601.3-201ENST00000622907 509 ntBASIC12.26□□□□□ -0.45
SSBP3Q9BWW4 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSBP3Q9BWW4 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSBP3Q9BWW4 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC12.26□□□□□ -0.45
SSBP3Q9BWW4 MRPL37P1-201ENST00000592451 1337 ntBASIC12.26□□□□□ -0.45
SSBP3Q9BWW4 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
SSBP3Q9BWW4 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSBP3Q9BWW4 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSBP3Q9BWW4 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSBP3Q9BWW4 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC12.26□□□□□ -0.45
SSBP3Q9BWW4 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSBP3Q9BWW4 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
SSBP3Q9BWW4 AC232323.1-201ENST00000540724 2099 ntBASIC12.26□□□□□ -0.45
SSBP3Q9BWW4 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSBP3Q9BWW4 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SSBP3Q9BWW4 AC138028.6-201ENST00000616106 1482 ntBASIC12.26□□□□□ -0.45
SSBP3Q9BWW4 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC12.26□□□□□ -0.45
SSBP3Q9BWW4 AC079781.5-202ENST00000641784 3743 ntBASIC12.26□□□□□ -0.45
SSBP3Q9BWW4 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSBP3Q9BWW4 AC087386.2-201ENST00000623212 4637 ntBASIC12.26□□□□□ -0.45
SSBP3Q9BWW4 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSBP3Q9BWW4 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC12.26□□□□□ -0.45
SSBP3Q9BWW4 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSBP3Q9BWW4 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC12.25□□□□□ -0.45
SSBP3Q9BWW4 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
SSBP3Q9BWW4 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSBP3Q9BWW4 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
SSBP3Q9BWW4 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSBP3Q9BWW4 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SSBP3Q9BWW4 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSBP3Q9BWW4 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SSBP3Q9BWW4 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSBP3Q9BWW4 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SSBP3Q9BWW4 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
SSBP3Q9BWW4 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
SSBP3Q9BWW4 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
SSBP3Q9BWW4 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSBP3Q9BWW4 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSBP3Q9BWW4 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
SSBP3Q9BWW4 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSBP3Q9BWW4 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms