Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
PCGF1Q9BSM1 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
PCGF1Q9BSM1 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
PCGF1Q9BSM1 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PCGF1Q9BSM1 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC12.39□□□□□ -0.43
PCGF1Q9BSM1 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
PCGF1Q9BSM1 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC12.38□□□□□ -0.43
PCGF1Q9BSM1 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PCGF1Q9BSM1 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PCGF1Q9BSM1 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
PCGF1Q9BSM1 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
PCGF1Q9BSM1 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PCGF1Q9BSM1 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PCGF1Q9BSM1 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PCGF1Q9BSM1 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PCGF1Q9BSM1 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC12.38□□□□□ -0.43
PCGF1Q9BSM1 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
PCGF1Q9BSM1 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC12.38□□□□□ -0.43
PCGF1Q9BSM1 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
PCGF1Q9BSM1 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
PCGF1Q9BSM1 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
PCGF1Q9BSM1 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PCGF1Q9BSM1 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
PCGF1Q9BSM1 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PCGF1Q9BSM1 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC12.38□□□□□ -0.43
PCGF1Q9BSM1 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PCGF1Q9BSM1 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
PCGF1Q9BSM1 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
PCGF1Q9BSM1 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PCGF1Q9BSM1 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
PCGF1Q9BSM1 SNX21-203ENST00000372541 771 ntTSL 2 BASIC12.38□□□□□ -0.43
PCGF1Q9BSM1 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC12.38□□□□□ -0.43
PCGF1Q9BSM1 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
PCGF1Q9BSM1 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
PCGF1Q9BSM1 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC12.38□□□□□ -0.43
PCGF1Q9BSM1 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC12.38□□□□□ -0.43
PCGF1Q9BSM1 Z93015.1-201ENST00000451718 390 ntBASIC12.38□□□□□ -0.43
PCGF1Q9BSM1 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC12.38□□□□□ -0.43
PCGF1Q9BSM1 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC12.38□□□□□ -0.43
PCGF1Q9BSM1 COX5BP1-201ENST00000507622 393 ntBASIC12.38□□□□□ -0.43
PCGF1Q9BSM1 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
PCGF1Q9BSM1 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC12.38□□□□□ -0.43
PCGF1Q9BSM1 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
PCGF1Q9BSM1 USB1-203ENST00000539737 1212 ntTSL 2 BASIC12.38□□□□□ -0.43
PCGF1Q9BSM1 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC12.38□□□□□ -0.43
PCGF1Q9BSM1 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC12.38□□□□□ -0.43
PCGF1Q9BSM1 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
PCGF1Q9BSM1 DERL2-202ENST00000570848 657 ntTSL 5 BASIC12.38□□□□□ -0.43
PCGF1Q9BSM1 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC12.38□□□□□ -0.43
PCGF1Q9BSM1 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC12.38□□□□□ -0.43
PCGF1Q9BSM1 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
PCGF1Q9BSM1 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC12.38□□□□□ -0.43
PCGF1Q9BSM1 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC12.38□□□□□ -0.43
PCGF1Q9BSM1 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
PCGF1Q9BSM1 APP-205ENST00000358918 2366 ntTSL 5 BASIC12.38□□□□□ -0.43
PCGF1Q9BSM1 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
PCGF1Q9BSM1 LILRP1-201ENST00000444199 1370 ntBASIC12.38□□□□□ -0.43
PCGF1Q9BSM1 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
PCGF1Q9BSM1 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC12.38□□□□□ -0.43
PCGF1Q9BSM1 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC12.38□□□□□ -0.43
PCGF1Q9BSM1 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
PCGF1Q9BSM1 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PCGF1Q9BSM1 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
PCGF1Q9BSM1 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
PCGF1Q9BSM1 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC12.38□□□□□ -0.43
PCGF1Q9BSM1 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
PCGF1Q9BSM1 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC12.38□□□□□ -0.43
PCGF1Q9BSM1 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
PCGF1Q9BSM1 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PCGF1Q9BSM1 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC12.38□□□□□ -0.43
PCGF1Q9BSM1 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
PCGF1Q9BSM1 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
PCGF1Q9BSM1 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
PCGF1Q9BSM1 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC12.38□□□□□ -0.43
PCGF1Q9BSM1 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
PCGF1Q9BSM1 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
PCGF1Q9BSM1 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC12.37□□□□□ -0.43
PCGF1Q9BSM1 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PCGF1Q9BSM1 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PCGF1Q9BSM1 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PCGF1Q9BSM1 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
PCGF1Q9BSM1 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
PCGF1Q9BSM1 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC12.37□□□□□ -0.43
PCGF1Q9BSM1 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC12.37□□□□□ -0.43
PCGF1Q9BSM1 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC12.37□□□□□ -0.43
PCGF1Q9BSM1 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
PCGF1Q9BSM1 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PCGF1Q9BSM1 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PCGF1Q9BSM1 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PCGF1Q9BSM1 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PCGF1Q9BSM1 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC12.37□□□□□ -0.43
PCGF1Q9BSM1 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PCGF1Q9BSM1 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
PCGF1Q9BSM1 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
PCGF1Q9BSM1 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PCGF1Q9BSM1 MIR1908-201ENST00000410394 80 ntBASIC12.37□□□□□ -0.43
PCGF1Q9BSM1 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC12.37□□□□□ -0.43
PCGF1Q9BSM1 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
PCGF1Q9BSM1 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC12.37□□□□□ -0.43
PCGF1Q9BSM1 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC12.37□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms