Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
NICN1Q9BSH3 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
NICN1Q9BSH3 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
NICN1Q9BSH3 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
NICN1Q9BSH3 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC12.62□□□□□ -0.39
NICN1Q9BSH3 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
NICN1Q9BSH3 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
NICN1Q9BSH3 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC12.62□□□□□ -0.39
NICN1Q9BSH3 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NICN1Q9BSH3 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NICN1Q9BSH3 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NICN1Q9BSH3 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
NICN1Q9BSH3 MRPL37P1-201ENST00000592451 1337 ntBASIC12.62□□□□□ -0.39
NICN1Q9BSH3 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NICN1Q9BSH3 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
NICN1Q9BSH3 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC12.61□□□□□ -0.39
NICN1Q9BSH3 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
NICN1Q9BSH3 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC12.61□□□□□ -0.39
NICN1Q9BSH3 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NICN1Q9BSH3 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC12.61□□□□□ -0.39
NICN1Q9BSH3 DGCR9-201ENST00000609630 2415 ntBASIC12.61□□□□□ -0.39
NICN1Q9BSH3 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
NICN1Q9BSH3 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
NICN1Q9BSH3 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NICN1Q9BSH3 COL6A4P2-202ENST00000504443 2753 ntBASIC12.61□□□□□ -0.39
NICN1Q9BSH3 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC12.61□□□□□ -0.39
NICN1Q9BSH3 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
NICN1Q9BSH3 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NICN1Q9BSH3 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
NICN1Q9BSH3 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC12.61□□□□□ -0.39
NICN1Q9BSH3 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NICN1Q9BSH3 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
NICN1Q9BSH3 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
NICN1Q9BSH3 DDC-213ENST00000617822 1809 ntTSL 3 BASIC12.61□□□□□ -0.39
NICN1Q9BSH3 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
NICN1Q9BSH3 RPS15-201ENST00000233609 534 ntTSL 2 BASIC12.61□□□□□ -0.39
NICN1Q9BSH3 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
NICN1Q9BSH3 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
NICN1Q9BSH3 TLE1P1-201ENST00000422965 589 ntBASIC12.61□□□□□ -0.39
NICN1Q9BSH3 AC134915.1-201ENST00000426461 574 ntBASIC12.61□□□□□ -0.39
NICN1Q9BSH3 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
NICN1Q9BSH3 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC12.61□□□□□ -0.39
NICN1Q9BSH3 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
NICN1Q9BSH3 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC12.61□□□□□ -0.39
NICN1Q9BSH3 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC12.61□□□□□ -0.39
NICN1Q9BSH3 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC12.61□□□□□ -0.39
NICN1Q9BSH3 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC12.61□□□□□ -0.39
NICN1Q9BSH3 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC12.61□□□□□ -0.39
NICN1Q9BSH3 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC12.61□□□□□ -0.39
NICN1Q9BSH3 RPS15-205ENST00000586686 562 ntTSL 5 BASIC12.61□□□□□ -0.39
NICN1Q9BSH3 RPS15-208ENST00000591804 711 ntTSL 5 BASIC12.61□□□□□ -0.39
NICN1Q9BSH3 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
NICN1Q9BSH3 RNA5-8SN1-201ENST00000610460 153 ntBASIC12.61□□□□□ -0.39
NICN1Q9BSH3 RNA5-8SN5-202ENST00000612463 153 ntBASIC12.61□□□□□ -0.39
NICN1Q9BSH3 RNA5-8SN4-201ENST00000613359 153 ntBASIC12.61□□□□□ -0.39
NICN1Q9BSH3 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC12.61□□□□□ -0.39
NICN1Q9BSH3 RNA5-8SN5-201ENST00000619471 153 ntBASIC12.61□□□□□ -0.39
NICN1Q9BSH3 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC12.61□□□□□ -0.39
NICN1Q9BSH3 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC12.61□□□□□ -0.39
NICN1Q9BSH3 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NICN1Q9BSH3 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
NICN1Q9BSH3 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
NICN1Q9BSH3 GALC-206ENST00000544807 2528 ntTSL 2 BASIC12.61□□□□□ -0.39
NICN1Q9BSH3 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NICN1Q9BSH3 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
NICN1Q9BSH3 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
NICN1Q9BSH3 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC12.61□□□□□ -0.39
NICN1Q9BSH3 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
NICN1Q9BSH3 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC12.61□□□□□ -0.39
NICN1Q9BSH3 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NICN1Q9BSH3 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NICN1Q9BSH3 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC12.61□□□□□ -0.39
NICN1Q9BSH3 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
NICN1Q9BSH3 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC12.61□□□□□ -0.39
NICN1Q9BSH3 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC12.61□□□□□ -0.39
NICN1Q9BSH3 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
NICN1Q9BSH3 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NICN1Q9BSH3 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NICN1Q9BSH3 AC090643.2-201ENST00000623442 2029 ntBASIC12.61□□□□□ -0.39
NICN1Q9BSH3 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
NICN1Q9BSH3 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
NICN1Q9BSH3 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NICN1Q9BSH3 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
NICN1Q9BSH3 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
NICN1Q9BSH3 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC12.6□□□□□ -0.39
NICN1Q9BSH3 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NICN1Q9BSH3 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
NICN1Q9BSH3 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
NICN1Q9BSH3 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
NICN1Q9BSH3 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC12.6□□□□□ -0.39
NICN1Q9BSH3 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
NICN1Q9BSH3 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NICN1Q9BSH3 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NICN1Q9BSH3 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC12.6□□□□□ -0.39
NICN1Q9BSH3 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC12.6□□□□□ -0.39
NICN1Q9BSH3 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NICN1Q9BSH3 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC12.6□□□□□ -0.39
NICN1Q9BSH3 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
NICN1Q9BSH3 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
NICN1Q9BSH3 TCAF1P1-201ENST00000414990 2232 ntBASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms