Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 BNIP3P13-201ENST00000599968 566 ntBASIC12.14□□□□□ -0.47
GAFA1Q96PS6 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC12.14□□□□□ -0.47
GAFA1Q96PS6 AC022748.3-201ENST00000621828 275 ntBASIC12.14□□□□□ -0.47
GAFA1Q96PS6 PCBP2-OT1-201ENST00000634357 590 ntBASIC12.14□□□□□ -0.47
GAFA1Q96PS6 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
GAFA1Q96PS6 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
GAFA1Q96PS6 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
GAFA1Q96PS6 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
GAFA1Q96PS6 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
GAFA1Q96PS6 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
GAFA1Q96PS6 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC12.14□□□□□ -0.47
GAFA1Q96PS6 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
GAFA1Q96PS6 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
GAFA1Q96PS6 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
GAFA1Q96PS6 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
GAFA1Q96PS6 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
GAFA1Q96PS6 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
GAFA1Q96PS6 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC12.14□□□□□ -0.47
GAFA1Q96PS6 AC020910.6-201ENST00000623084 1459 ntBASIC12.14□□□□□ -0.47
GAFA1Q96PS6 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
GAFA1Q96PS6 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
GAFA1Q96PS6 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
GAFA1Q96PS6 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
GAFA1Q96PS6 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
GAFA1Q96PS6 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC12.13□□□□□ -0.47
GAFA1Q96PS6 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
GAFA1Q96PS6 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
GAFA1Q96PS6 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
GAFA1Q96PS6 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
GAFA1Q96PS6 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC12.13□□□□□ -0.47
GAFA1Q96PS6 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
GAFA1Q96PS6 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
GAFA1Q96PS6 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
GAFA1Q96PS6 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
GAFA1Q96PS6 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
GAFA1Q96PS6 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
GAFA1Q96PS6 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC12.13□□□□□ -0.47
GAFA1Q96PS6 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC12.13□□□□□ -0.47
GAFA1Q96PS6 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC12.13□□□□□ -0.47
GAFA1Q96PS6 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
GAFA1Q96PS6 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
GAFA1Q96PS6 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC12.13□□□□□ -0.47
GAFA1Q96PS6 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
GAFA1Q96PS6 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
GAFA1Q96PS6 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC12.13□□□□□ -0.47
GAFA1Q96PS6 ACTBP11-201ENST00000436287 1126 ntBASIC12.13□□□□□ -0.47
GAFA1Q96PS6 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC12.13□□□□□ -0.47
GAFA1Q96PS6 AC104306.2-201ENST00000451877 341 ntBASIC12.13□□□□□ -0.47
GAFA1Q96PS6 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
GAFA1Q96PS6 AC108725.1-201ENST00000495472 409 ntBASIC12.13□□□□□ -0.47
GAFA1Q96PS6 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC12.13□□□□□ -0.47
GAFA1Q96PS6 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC12.13□□□□□ -0.47
GAFA1Q96PS6 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC12.13□□□□□ -0.47
GAFA1Q96PS6 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
GAFA1Q96PS6 RN7SL219P-201ENST00000582872 296 ntBASIC12.13□□□□□ -0.47
GAFA1Q96PS6 DIO1-215ENST00000610607 796 ntTSL 5 BASIC12.13□□□□□ -0.47
GAFA1Q96PS6 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
GAFA1Q96PS6 AC133540.1-201ENST00000620845 1019 ntBASIC12.13□□□□□ -0.47
GAFA1Q96PS6 AL008638.5-201ENST00000623814 1298 ntBASIC12.13□□□□□ -0.47
GAFA1Q96PS6 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
GAFA1Q96PS6 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
GAFA1Q96PS6 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
GAFA1Q96PS6 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
GAFA1Q96PS6 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC12.13□□□□□ -0.47
GAFA1Q96PS6 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
GAFA1Q96PS6 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
GAFA1Q96PS6 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC12.13□□□□□ -0.47
GAFA1Q96PS6 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
GAFA1Q96PS6 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
GAFA1Q96PS6 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
GAFA1Q96PS6 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
GAFA1Q96PS6 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC12.13□□□□□ -0.47
GAFA1Q96PS6 CYP4F23P-201ENST00000593402 1579 ntBASIC12.13□□□□□ -0.47
GAFA1Q96PS6 AC027601.5-201ENST00000624065 2482 ntBASIC12.13□□□□□ -0.47
GAFA1Q96PS6 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
GAFA1Q96PS6 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
GAFA1Q96PS6 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
GAFA1Q96PS6 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
GAFA1Q96PS6 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
GAFA1Q96PS6 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
GAFA1Q96PS6 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC12.13□□□□□ -0.47
GAFA1Q96PS6 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
GAFA1Q96PS6 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
GAFA1Q96PS6 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
GAFA1Q96PS6 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
GAFA1Q96PS6 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
GAFA1Q96PS6 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC12.12□□□□□ -0.47
GAFA1Q96PS6 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
GAFA1Q96PS6 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
GAFA1Q96PS6 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC12.12□□□□□ -0.47
GAFA1Q96PS6 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
GAFA1Q96PS6 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
GAFA1Q96PS6 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
GAFA1Q96PS6 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
GAFA1Q96PS6 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
GAFA1Q96PS6 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC12.12□□□□□ -0.47
GAFA1Q96PS6 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC12.12□□□□□ -0.47
GAFA1Q96PS6 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
GAFA1Q96PS6 AC004899.1-201ENST00000424687 1714 ntBASIC12.12□□□□□ -0.47
GAFA1Q96PS6 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms