Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SNX27Q96L92 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
SNX27Q96L92 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SNX27Q96L92 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.71■□□□□ 0.11
SNX27Q96L92 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SNX27Q96L92 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.71■□□□□ 0.11
SNX27Q96L92 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.71■□□□□ 0.11
SNX27Q96L92 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SNX27Q96L92 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC15.71■□□□□ 0.11
SNX27Q96L92 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SNX27Q96L92 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SNX27Q96L92 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SNX27Q96L92 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
SNX27Q96L92 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
SNX27Q96L92 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC15.71■□□□□ 0.11
SNX27Q96L92 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SNX27Q96L92 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SNX27Q96L92 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.71■□□□□ 0.11
SNX27Q96L92 PHF5A-201ENST00000216252 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SNX27Q96L92 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
SNX27Q96L92 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC15.71■□□□□ 0.11
SNX27Q96L92 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SNX27Q96L92 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SNX27Q96L92 PDIA3P2-201ENST00000428073 158 ntBASIC15.71■□□□□ 0.11
SNX27Q96L92 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC15.71■□□□□ 0.11
SNX27Q96L92 AC006335.1-201ENST00000445200 547 ntBASIC15.71■□□□□ 0.11
SNX27Q96L92 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC15.71■□□□□ 0.11
SNX27Q96L92 AC073150.1-201ENST00000450406 1084 ntBASIC15.71■□□□□ 0.11
SNX27Q96L92 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC15.71■□□□□ 0.11
SNX27Q96L92 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC15.71■□□□□ 0.11
SNX27Q96L92 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
SNX27Q96L92 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
SNX27Q96L92 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC15.71■□□□□ 0.11
SNX27Q96L92 AL353622.2-201ENST00000605846 425 ntBASIC15.71■□□□□ 0.11
SNX27Q96L92 MEG3_2.1-201ENST00000611456 105 ntBASIC15.71■□□□□ 0.11
SNX27Q96L92 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SNX27Q96L92 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SNX27Q96L92 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
SNX27Q96L92 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SNX27Q96L92 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SNX27Q96L92 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC15.71■□□□□ 0.11
SNX27Q96L92 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SNX27Q96L92 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC15.71■□□□□ 0.11
SNX27Q96L92 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC15.71■□□□□ 0.11
SNX27Q96L92 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
SNX27Q96L92 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SNX27Q96L92 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SNX27Q96L92 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
SNX27Q96L92 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SNX27Q96L92 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
SNX27Q96L92 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SNX27Q96L92 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
SNX27Q96L92 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SNX27Q96L92 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SNX27Q96L92 STK26-204ENST00000481105 1835 ntTSL 2 BASIC15.71■□□□□ 0.1
SNX27Q96L92 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SNX27Q96L92 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.7■□□□□ 0.1
SNX27Q96L92 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SNX27Q96L92 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SNX27Q96L92 AL390755.1-201ENST00000623716 2027 ntBASIC15.7■□□□□ 0.1
SNX27Q96L92 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.7■□□□□ 0.1
SNX27Q96L92 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC15.7■□□□□ 0.1
SNX27Q96L92 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SNX27Q96L92 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC15.7■□□□□ 0.1
SNX27Q96L92 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SNX27Q96L92 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SNX27Q96L92 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SNX27Q96L92 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC15.7■□□□□ 0.1
SNX27Q96L92 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SNX27Q96L92 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SNX27Q96L92 LINC01165-201ENST00000445190 1623 ntBASIC15.7■□□□□ 0.1
SNX27Q96L92 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SNX27Q96L92 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SNX27Q96L92 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
SNX27Q96L92 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC15.7■□□□□ 0.1
SNX27Q96L92 NCR3-202ENST00000376071 541 ntTSL 5 BASIC15.7■□□□□ 0.1
SNX27Q96L92 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC15.7■□□□□ 0.1
SNX27Q96L92 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC15.7■□□□□ 0.1
SNX27Q96L92 TSPY25P-201ENST00000429463 745 ntBASIC15.7■□□□□ 0.1
SNX27Q96L92 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC15.7■□□□□ 0.1
SNX27Q96L92 AL161932.2-201ENST00000435436 679 ntBASIC15.7■□□□□ 0.1
SNX27Q96L92 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC15.7■□□□□ 0.1
SNX27Q96L92 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC15.7■□□□□ 0.1
SNX27Q96L92 AC005586.2-201ENST00000563946 837 ntBASIC15.7■□□□□ 0.1
SNX27Q96L92 FGFR3P5-201ENST00000564496 886 ntBASIC15.7■□□□□ 0.1
SNX27Q96L92 AL022344.2-201ENST00000568976 968 ntBASIC15.7■□□□□ 0.1
SNX27Q96L92 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC15.7■□□□□ 0.1
SNX27Q96L92 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC15.7■□□□□ 0.1
SNX27Q96L92 EIF5AP2-201ENST00000585668 1047 ntBASIC15.7■□□□□ 0.1
SNX27Q96L92 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC15.7■□□□□ 0.1
SNX27Q96L92 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC15.7■□□□□ 0.1
SNX27Q96L92 AC009950.1-210ENST00000594622 553 ntTSL 3 BASIC15.7■□□□□ 0.1
SNX27Q96L92 AC020922.3-201ENST00000595064 547 ntBASIC15.7■□□□□ 0.1
SNX27Q96L92 MIR6074-201ENST00000612054 107 ntBASIC15.7■□□□□ 0.1
SNX27Q96L92 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SNX27Q96L92 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC15.7■□□□□ 0.1
SNX27Q96L92 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SNX27Q96L92 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SNX27Q96L92 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.7■□□□□ 0.1
SNX27Q96L92 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms