Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
LRRC46Q96FV0 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LRRC46Q96FV0 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC13.32□□□□□ -0.28
LRRC46Q96FV0 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
LRRC46Q96FV0 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LRRC46Q96FV0 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LRRC46Q96FV0 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
LRRC46Q96FV0 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LRRC46Q96FV0 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LRRC46Q96FV0 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC13.32□□□□□ -0.28
LRRC46Q96FV0 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
LRRC46Q96FV0 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LRRC46Q96FV0 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
LRRC46Q96FV0 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
LRRC46Q96FV0 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC13.32□□□□□ -0.28
LRRC46Q96FV0 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
LRRC46Q96FV0 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LRRC46Q96FV0 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LRRC46Q96FV0 AL136309.1-201ENST00000403917 691 ntBASIC13.32□□□□□ -0.28
LRRC46Q96FV0 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
LRRC46Q96FV0 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.32□□□□□ -0.28
LRRC46Q96FV0 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
LRRC46Q96FV0 HNRNPA1P63-201ENST00000427917 963 ntBASIC13.32□□□□□ -0.28
LRRC46Q96FV0 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LRRC46Q96FV0 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC13.32□□□□□ -0.28
LRRC46Q96FV0 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LRRC46Q96FV0 AL133466.1-201ENST00000447582 150 ntBASIC13.32□□□□□ -0.28
LRRC46Q96FV0 BX284668.4-201ENST00000453917 508 ntBASIC13.32□□□□□ -0.28
LRRC46Q96FV0 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
LRRC46Q96FV0 AC005740.2-201ENST00000511085 419 ntBASIC13.32□□□□□ -0.28
LRRC46Q96FV0 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC13.32□□□□□ -0.28
LRRC46Q96FV0 NEU3-202ENST00000526068 431 ntTSL 2 BASIC13.32□□□□□ -0.28
LRRC46Q96FV0 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC13.32□□□□□ -0.28
LRRC46Q96FV0 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC13.32□□□□□ -0.28
LRRC46Q96FV0 DKFZP434H168-201ENST00000567381 1905 ntBASIC13.32□□□□□ -0.28
LRRC46Q96FV0 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.32□□□□□ -0.28
LRRC46Q96FV0 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LRRC46Q96FV0 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LRRC46Q96FV0 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
LRRC46Q96FV0 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LRRC46Q96FV0 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LRRC46Q96FV0 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC13.32□□□□□ -0.28
LRRC46Q96FV0 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.32□□□□□ -0.28
LRRC46Q96FV0 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.32□□□□□ -0.28
LRRC46Q96FV0 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LRRC46Q96FV0 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
LRRC46Q96FV0 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
LRRC46Q96FV0 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LRRC46Q96FV0 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LRRC46Q96FV0 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.32□□□□□ -0.28
LRRC46Q96FV0 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
LRRC46Q96FV0 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
LRRC46Q96FV0 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LRRC46Q96FV0 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LRRC46Q96FV0 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
LRRC46Q96FV0 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LRRC46Q96FV0 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LRRC46Q96FV0 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
LRRC46Q96FV0 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LRRC46Q96FV0 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LRRC46Q96FV0 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LRRC46Q96FV0 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
LRRC46Q96FV0 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
LRRC46Q96FV0 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LRRC46Q96FV0 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC13.31□□□□□ -0.28
LRRC46Q96FV0 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.31□□□□□ -0.28
LRRC46Q96FV0 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
LRRC46Q96FV0 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LRRC46Q96FV0 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LRRC46Q96FV0 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LRRC46Q96FV0 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.31□□□□□ -0.28
LRRC46Q96FV0 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.31□□□□□ -0.28
LRRC46Q96FV0 TISP43-201ENST00000409793 538 ntTSL 4 BASIC13.31□□□□□ -0.28
LRRC46Q96FV0 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC13.31□□□□□ -0.28
LRRC46Q96FV0 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC13.31□□□□□ -0.28
LRRC46Q96FV0 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC13.31□□□□□ -0.28
LRRC46Q96FV0 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC13.31□□□□□ -0.28
LRRC46Q96FV0 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC13.31□□□□□ -0.28
LRRC46Q96FV0 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC13.31□□□□□ -0.28
LRRC46Q96FV0 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LRRC46Q96FV0 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC13.31□□□□□ -0.28
LRRC46Q96FV0 ARL16-210ENST00000574938 751 ntTSL 2 BASIC13.31□□□□□ -0.28
LRRC46Q96FV0 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC13.31□□□□□ -0.28
LRRC46Q96FV0 AL136295.7-201ENST00000619226 1200 ntBASIC13.31□□□□□ -0.28
LRRC46Q96FV0 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
LRRC46Q96FV0 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.31□□□□□ -0.28
LRRC46Q96FV0 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC13.31□□□□□ -0.28
LRRC46Q96FV0 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
LRRC46Q96FV0 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC13.31□□□□□ -0.28
LRRC46Q96FV0 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LRRC46Q96FV0 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LRRC46Q96FV0 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
LRRC46Q96FV0 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.31□□□□□ -0.28
LRRC46Q96FV0 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LRRC46Q96FV0 AC127383.1-201ENST00000444697 1800 ntBASIC13.31□□□□□ -0.28
LRRC46Q96FV0 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.31□□□□□ -0.28
LRRC46Q96FV0 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LRRC46Q96FV0 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LRRC46Q96FV0 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC13.31□□□□□ -0.28
LRRC46Q96FV0 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms