Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.54□□□□□ -0.08
ECHDC3Q96DC8 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ECHDC3Q96DC8 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ECHDC3Q96DC8 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ECHDC3Q96DC8 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
ECHDC3Q96DC8 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ECHDC3Q96DC8 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ECHDC3Q96DC8 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ECHDC3Q96DC8 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ECHDC3Q96DC8 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ECHDC3Q96DC8 LBH-202ENST00000401506 485 ntTSL 3 BASIC14.54□□□□□ -0.08
ECHDC3Q96DC8 ACTG1P2-201ENST00000415776 1125 ntBASIC14.54□□□□□ -0.08
ECHDC3Q96DC8 ACTG1P11-201ENST00000425411 1125 ntBASIC14.54□□□□□ -0.08
ECHDC3Q96DC8 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ECHDC3Q96DC8 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC14.54□□□□□ -0.08
ECHDC3Q96DC8 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC14.54□□□□□ -0.08
ECHDC3Q96DC8 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC14.54□□□□□ -0.08
ECHDC3Q96DC8 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
ECHDC3Q96DC8 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
ECHDC3Q96DC8 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC14.54□□□□□ -0.08
ECHDC3Q96DC8 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC14.54□□□□□ -0.08
ECHDC3Q96DC8 AC091544.8-201ENST00000619490 361 ntBASIC14.54□□□□□ -0.08
ECHDC3Q96DC8 AL591471.1-201ENST00000621855 229 ntBASIC14.54□□□□□ -0.08
ECHDC3Q96DC8 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC14.54□□□□□ -0.08
ECHDC3Q96DC8 NAP1L6-202ENST00000641404 1222 ntBASIC14.54□□□□□ -0.08
ECHDC3Q96DC8 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
ECHDC3Q96DC8 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ECHDC3Q96DC8 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ECHDC3Q96DC8 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ECHDC3Q96DC8 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
ECHDC3Q96DC8 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ECHDC3Q96DC8 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
ECHDC3Q96DC8 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
ECHDC3Q96DC8 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ECHDC3Q96DC8 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC14.54□□□□□ -0.08
ECHDC3Q96DC8 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
ECHDC3Q96DC8 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.54□□□□□ -0.08
ECHDC3Q96DC8 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ECHDC3Q96DC8 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.54□□□□□ -0.08
ECHDC3Q96DC8 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ECHDC3Q96DC8 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ECHDC3Q96DC8 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
ECHDC3Q96DC8 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ECHDC3Q96DC8 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
ECHDC3Q96DC8 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
ECHDC3Q96DC8 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ECHDC3Q96DC8 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ECHDC3Q96DC8 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
ECHDC3Q96DC8 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC14.53□□□□□ -0.08
ECHDC3Q96DC8 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ECHDC3Q96DC8 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ECHDC3Q96DC8 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
ECHDC3Q96DC8 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ECHDC3Q96DC8 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC14.53□□□□□ -0.08
ECHDC3Q96DC8 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
ECHDC3Q96DC8 AP002353.1-201ENST00000528257 1599 ntBASIC14.53□□□□□ -0.08
ECHDC3Q96DC8 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ECHDC3Q96DC8 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ECHDC3Q96DC8 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ECHDC3Q96DC8 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ECHDC3Q96DC8 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
ECHDC3Q96DC8 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ECHDC3Q96DC8 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
ECHDC3Q96DC8 AC239868.1-201ENST00000369385 493 ntBASIC14.53□□□□□ -0.08
ECHDC3Q96DC8 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC14.53□□□□□ -0.08
ECHDC3Q96DC8 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ECHDC3Q96DC8 MIR769-201ENST00000390225 118 ntBASIC14.53□□□□□ -0.08
ECHDC3Q96DC8 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC14.53□□□□□ -0.08
ECHDC3Q96DC8 TSPY25P-201ENST00000429463 745 ntBASIC14.53□□□□□ -0.08
ECHDC3Q96DC8 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC14.53□□□□□ -0.08
ECHDC3Q96DC8 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC14.53□□□□□ -0.08
ECHDC3Q96DC8 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC14.53□□□□□ -0.08
ECHDC3Q96DC8 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC14.53□□□□□ -0.08
ECHDC3Q96DC8 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
ECHDC3Q96DC8 IGHV3OR16-16-201ENST00000563644 343 ntBASIC14.53□□□□□ -0.08
ECHDC3Q96DC8 MIR3619-201ENST00000579667 83 ntBASIC14.53□□□□□ -0.08
ECHDC3Q96DC8 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC14.53□□□□□ -0.08
ECHDC3Q96DC8 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC14.53□□□□□ -0.08
ECHDC3Q96DC8 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC14.53□□□□□ -0.08
ECHDC3Q96DC8 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ECHDC3Q96DC8 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
ECHDC3Q96DC8 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ECHDC3Q96DC8 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ECHDC3Q96DC8 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.53□□□□□ -0.08
ECHDC3Q96DC8 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.53□□□□□ -0.08
ECHDC3Q96DC8 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.53□□□□□ -0.08
ECHDC3Q96DC8 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
ECHDC3Q96DC8 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ECHDC3Q96DC8 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ECHDC3Q96DC8 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ECHDC3Q96DC8 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ECHDC3Q96DC8 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ECHDC3Q96DC8 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
ECHDC3Q96DC8 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC14.53□□□□□ -0.08
ECHDC3Q96DC8 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ECHDC3Q96DC8 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
ECHDC3Q96DC8 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
ECHDC3Q96DC8 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.52□□□□□ -0.08
ECHDC3Q96DC8 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ECHDC3Q96DC8 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms