Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
FOXRED1Q96CU9 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
FOXRED1Q96CU9 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC12.81□□□□□ -0.36
FOXRED1Q96CU9 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
FOXRED1Q96CU9 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
FOXRED1Q96CU9 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FOXRED1Q96CU9 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
FOXRED1Q96CU9 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FOXRED1Q96CU9 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
FOXRED1Q96CU9 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FOXRED1Q96CU9 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FOXRED1Q96CU9 AC015688.4-201ENST00000580780 1647 ntBASIC12.81□□□□□ -0.36
FOXRED1Q96CU9 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FOXRED1Q96CU9 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FOXRED1Q96CU9 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FOXRED1Q96CU9 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
FOXRED1Q96CU9 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FOXRED1Q96CU9 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
FOXRED1Q96CU9 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
FOXRED1Q96CU9 AC003102.2-201ENST00000589195 1469 ntBASIC12.81□□□□□ -0.36
FOXRED1Q96CU9 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FOXRED1Q96CU9 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
FOXRED1Q96CU9 CALY-202ENST00000368555 783 ntTSL 2 BASIC12.81□□□□□ -0.36
FOXRED1Q96CU9 AC087499.6-201ENST00000411576 835 ntBASIC12.81□□□□□ -0.36
FOXRED1Q96CU9 PIN1P1-201ENST00000412108 996 ntBASIC12.81□□□□□ -0.36
FOXRED1Q96CU9 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
FOXRED1Q96CU9 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
FOXRED1Q96CU9 DFFBP1-201ENST00000433250 979 ntBASIC12.81□□□□□ -0.36
FOXRED1Q96CU9 RASL12-203ENST00000434605 982 ntTSL 2 BASIC12.81□□□□□ -0.36
FOXRED1Q96CU9 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
FOXRED1Q96CU9 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
FOXRED1Q96CU9 AL589987.1-201ENST00000453380 819 ntBASIC12.81□□□□□ -0.36
FOXRED1Q96CU9 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC12.81□□□□□ -0.36
FOXRED1Q96CU9 VDAC1P7-201ENST00000462417 847 ntBASIC12.81□□□□□ -0.36
FOXRED1Q96CU9 RN7SL399P-201ENST00000471648 279 ntBASIC12.81□□□□□ -0.36
FOXRED1Q96CU9 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
FOXRED1Q96CU9 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
FOXRED1Q96CU9 AC055876.2-201ENST00000531834 546 ntBASIC12.81□□□□□ -0.36
FOXRED1Q96CU9 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC12.81□□□□□ -0.36
FOXRED1Q96CU9 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
FOXRED1Q96CU9 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC12.81□□□□□ -0.36
FOXRED1Q96CU9 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC12.81□□□□□ -0.36
FOXRED1Q96CU9 AC007431.3-201ENST00000623221 587 ntBASIC12.81□□□□□ -0.36
FOXRED1Q96CU9 AC004840.1-201ENST00000636359 365 ntBASIC12.81□□□□□ -0.36
FOXRED1Q96CU9 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FOXRED1Q96CU9 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FOXRED1Q96CU9 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC12.81□□□□□ -0.36
FOXRED1Q96CU9 HPD-204ENST00000543163 1709 ntTSL 5 BASIC12.81□□□□□ -0.36
FOXRED1Q96CU9 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FOXRED1Q96CU9 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FOXRED1Q96CU9 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
FOXRED1Q96CU9 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC12.81□□□□□ -0.36
FOXRED1Q96CU9 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FOXRED1Q96CU9 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC12.81□□□□□ -0.36
FOXRED1Q96CU9 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
FOXRED1Q96CU9 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FOXRED1Q96CU9 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FOXRED1Q96CU9 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC12.81□□□□□ -0.36
FOXRED1Q96CU9 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
FOXRED1Q96CU9 AL391825.1-201ENST00000457671 1364 ntBASIC12.81□□□□□ -0.36
FOXRED1Q96CU9 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
FOXRED1Q96CU9 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
FOXRED1Q96CU9 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
FOXRED1Q96CU9 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
FOXRED1Q96CU9 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
FOXRED1Q96CU9 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
FOXRED1Q96CU9 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC12.8□□□□□ -0.36
FOXRED1Q96CU9 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
FOXRED1Q96CU9 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
FOXRED1Q96CU9 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
FOXRED1Q96CU9 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
FOXRED1Q96CU9 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
FOXRED1Q96CU9 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
FOXRED1Q96CU9 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC12.8□□□□□ -0.36
FOXRED1Q96CU9 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
FOXRED1Q96CU9 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC12.8□□□□□ -0.36
FOXRED1Q96CU9 CETP-203ENST00000566128 1733 ntTSL 5 BASIC12.8□□□□□ -0.36
FOXRED1Q96CU9 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
FOXRED1Q96CU9 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
FOXRED1Q96CU9 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC12.8□□□□□ -0.36
FOXRED1Q96CU9 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC12.8□□□□□ -0.36
FOXRED1Q96CU9 HADH-202ENST00000403312 1752 ntTSL 5 BASIC12.8□□□□□ -0.36
FOXRED1Q96CU9 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
FOXRED1Q96CU9 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
FOXRED1Q96CU9 TEX30-203ENST00000376022 828 ntTSL 2 BASIC12.8□□□□□ -0.36
FOXRED1Q96CU9 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
FOXRED1Q96CU9 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
FOXRED1Q96CU9 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
FOXRED1Q96CU9 OSM-203ENST00000403463 464 ntTSL 3 BASIC12.8□□□□□ -0.36
FOXRED1Q96CU9 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
FOXRED1Q96CU9 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC12.8□□□□□ -0.36
FOXRED1Q96CU9 SPTLC1P1-201ENST00000447199 261 ntBASIC12.8□□□□□ -0.36
FOXRED1Q96CU9 AC026434.2-201ENST00000506094 1078 ntBASIC12.8□□□□□ -0.36
FOXRED1Q96CU9 FTH1-202ENST00000526640 786 ntTSL 2 BASIC12.8□□□□□ -0.36
FOXRED1Q96CU9 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
FOXRED1Q96CU9 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC12.8□□□□□ -0.36
FOXRED1Q96CU9 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC12.8□□□□□ -0.36
FOXRED1Q96CU9 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC12.8□□□□□ -0.36
FOXRED1Q96CU9 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
FOXRED1Q96CU9 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms