Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
TRAF3IP1Q8TDR0 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.31■□□□□ 0.04
TRAF3IP1Q8TDR0 MIR6074-201ENST00000612054 107 ntBASIC15.31■□□□□ 0.04
TRAF3IP1Q8TDR0 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRAF3IP1Q8TDR0 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAF3IP1Q8TDR0 AP000593.2-201ENST00000542775 1433 ntBASIC15.31■□□□□ 0.04
TRAF3IP1Q8TDR0 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.31■□□□□ 0.04
TRAF3IP1Q8TDR0 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
TRAF3IP1Q8TDR0 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
TRAF3IP1Q8TDR0 ANKRD30BP2-201ENST00000435744 1610 ntBASIC15.31■□□□□ 0.04
TRAF3IP1Q8TDR0 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRAF3IP1Q8TDR0 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAF3IP1Q8TDR0 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAF3IP1Q8TDR0 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC15.31■□□□□ 0.04
TRAF3IP1Q8TDR0 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAF3IP1Q8TDR0 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAF3IP1Q8TDR0 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAF3IP1Q8TDR0 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAF3IP1Q8TDR0 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAF3IP1Q8TDR0 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
TRAF3IP1Q8TDR0 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC15.3■□□□□ 0.04
TRAF3IP1Q8TDR0 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAF3IP1Q8TDR0 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRAF3IP1Q8TDR0 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAF3IP1Q8TDR0 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
TRAF3IP1Q8TDR0 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAF3IP1Q8TDR0 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAF3IP1Q8TDR0 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAF3IP1Q8TDR0 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAF3IP1Q8TDR0 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAF3IP1Q8TDR0 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAF3IP1Q8TDR0 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC15.3■□□□□ 0.04
TRAF3IP1Q8TDR0 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAF3IP1Q8TDR0 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAF3IP1Q8TDR0 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
TRAF3IP1Q8TDR0 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAF3IP1Q8TDR0 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAF3IP1Q8TDR0 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC15.3■□□□□ 0.04
TRAF3IP1Q8TDR0 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.3■□□□□ 0.04
TRAF3IP1Q8TDR0 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAF3IP1Q8TDR0 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAF3IP1Q8TDR0 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRAF3IP1Q8TDR0 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAF3IP1Q8TDR0 AC215219.1-201ENST00000400706 1817 ntBASIC15.3■□□□□ 0.04
TRAF3IP1Q8TDR0 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRAF3IP1Q8TDR0 MPV17-205ENST00000402310 906 ntTSL 5 BASIC15.3■□□□□ 0.04
TRAF3IP1Q8TDR0 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAF3IP1Q8TDR0 RN7SKP175-201ENST00000408472 289 ntBASIC15.3■□□□□ 0.04
TRAF3IP1Q8TDR0 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC15.3■□□□□ 0.04
TRAF3IP1Q8TDR0 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC15.3■□□□□ 0.04
TRAF3IP1Q8TDR0 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC15.3■□□□□ 0.04
TRAF3IP1Q8TDR0 FAM8A4P-201ENST00000435433 1213 ntBASIC15.3■□□□□ 0.04
TRAF3IP1Q8TDR0 AL354989.2-201ENST00000435838 1540 ntBASIC15.3■□□□□ 0.04
TRAF3IP1Q8TDR0 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC15.3■□□□□ 0.04
TRAF3IP1Q8TDR0 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC15.3■□□□□ 0.04
TRAF3IP1Q8TDR0 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.3■□□□□ 0.04
TRAF3IP1Q8TDR0 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAF3IP1Q8TDR0 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC15.3■□□□□ 0.04
TRAF3IP1Q8TDR0 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.3■□□□□ 0.04
TRAF3IP1Q8TDR0 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC15.3■□□□□ 0.04
TRAF3IP1Q8TDR0 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAF3IP1Q8TDR0 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC15.3■□□□□ 0.04
TRAF3IP1Q8TDR0 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAF3IP1Q8TDR0 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.3■□□□□ 0.04
TRAF3IP1Q8TDR0 AC106820.3-201ENST00000561653 397 ntBASIC15.3■□□□□ 0.04
TRAF3IP1Q8TDR0 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC15.3■□□□□ 0.04
TRAF3IP1Q8TDR0 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC15.3■□□□□ 0.04
TRAF3IP1Q8TDR0 AC008735.3-201ENST00000596646 500 ntBASIC15.3■□□□□ 0.04
TRAF3IP1Q8TDR0 OR10B1P-201ENST00000601666 907 ntBASIC15.3■□□□□ 0.04
TRAF3IP1Q8TDR0 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
TRAF3IP1Q8TDR0 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAF3IP1Q8TDR0 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
TRAF3IP1Q8TDR0 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAF3IP1Q8TDR0 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC15.3■□□□□ 0.04
TRAF3IP1Q8TDR0 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAF3IP1Q8TDR0 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC15.3■□□□□ 0.04
TRAF3IP1Q8TDR0 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRAF3IP1Q8TDR0 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAF3IP1Q8TDR0 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC15.3■□□□□ 0.04
TRAF3IP1Q8TDR0 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
TRAF3IP1Q8TDR0 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRAF3IP1Q8TDR0 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAF3IP1Q8TDR0 AL928921.2-201ENST00000641325 2442 ntBASIC15.29■□□□□ 0.04
TRAF3IP1Q8TDR0 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
TRAF3IP1Q8TDR0 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAF3IP1Q8TDR0 AC012617.1-204ENST00000586340 2305 ntBASIC15.29■□□□□ 0.04
TRAF3IP1Q8TDR0 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC15.29■□□□□ 0.04
TRAF3IP1Q8TDR0 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAF3IP1Q8TDR0 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAF3IP1Q8TDR0 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC15.29■□□□□ 0.04
TRAF3IP1Q8TDR0 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
TRAF3IP1Q8TDR0 AC139712.1-201ENST00000378256 1875 ntBASIC15.29■□□□□ 0.04
TRAF3IP1Q8TDR0 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAF3IP1Q8TDR0 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAF3IP1Q8TDR0 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAF3IP1Q8TDR0 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAF3IP1Q8TDR0 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
TRAF3IP1Q8TDR0 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC15.29■□□□□ 0.04
TRAF3IP1Q8TDR0 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAF3IP1Q8TDR0 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms