Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC15.34■□□□□ 0.05
SHKBP1Q8TBC3 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
SHKBP1Q8TBC3 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SHKBP1Q8TBC3 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.34■□□□□ 0.05
SHKBP1Q8TBC3 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SHKBP1Q8TBC3 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SHKBP1Q8TBC3 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SHKBP1Q8TBC3 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.34■□□□□ 0.05
SHKBP1Q8TBC3 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SHKBP1Q8TBC3 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SHKBP1Q8TBC3 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SHKBP1Q8TBC3 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
SHKBP1Q8TBC3 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SHKBP1Q8TBC3 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
SHKBP1Q8TBC3 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SHKBP1Q8TBC3 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SHKBP1Q8TBC3 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC15.34■□□□□ 0.05
SHKBP1Q8TBC3 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SHKBP1Q8TBC3 AC069218.1-201ENST00000435269 762 ntBASIC15.34■□□□□ 0.05
SHKBP1Q8TBC3 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC15.34■□□□□ 0.05
SHKBP1Q8TBC3 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC15.34■□□□□ 0.05
SHKBP1Q8TBC3 POU5F1P2-201ENST00000521750 823 ntBASIC15.34■□□□□ 0.05
SHKBP1Q8TBC3 RBM8B-201ENST00000555532 525 ntBASIC15.34■□□□□ 0.05
SHKBP1Q8TBC3 MIR5572-201ENST00000583188 137 ntBASIC15.34■□□□□ 0.05
SHKBP1Q8TBC3 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC15.34■□□□□ 0.05
SHKBP1Q8TBC3 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC15.34■□□□□ 0.05
SHKBP1Q8TBC3 DDX5-235ENST00000630471 473 ntTSL 4 BASIC15.34■□□□□ 0.05
SHKBP1Q8TBC3 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SHKBP1Q8TBC3 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SHKBP1Q8TBC3 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SHKBP1Q8TBC3 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
SHKBP1Q8TBC3 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SHKBP1Q8TBC3 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC15.34■□□□□ 0.05
SHKBP1Q8TBC3 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SHKBP1Q8TBC3 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SHKBP1Q8TBC3 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SHKBP1Q8TBC3 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SHKBP1Q8TBC3 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SHKBP1Q8TBC3 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SHKBP1Q8TBC3 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SHKBP1Q8TBC3 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC15.34■□□□□ 0.05
SHKBP1Q8TBC3 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
SHKBP1Q8TBC3 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
SHKBP1Q8TBC3 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SHKBP1Q8TBC3 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SHKBP1Q8TBC3 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SHKBP1Q8TBC3 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
SHKBP1Q8TBC3 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
SHKBP1Q8TBC3 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
SHKBP1Q8TBC3 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SHKBP1Q8TBC3 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
SHKBP1Q8TBC3 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SHKBP1Q8TBC3 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SHKBP1Q8TBC3 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.33■□□□□ 0.04
SHKBP1Q8TBC3 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SHKBP1Q8TBC3 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
SHKBP1Q8TBC3 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SHKBP1Q8TBC3 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SHKBP1Q8TBC3 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SHKBP1Q8TBC3 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
SHKBP1Q8TBC3 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SHKBP1Q8TBC3 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC15.33■□□□□ 0.04
SHKBP1Q8TBC3 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SHKBP1Q8TBC3 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SHKBP1Q8TBC3 HNRNPA1P27-201ENST00000412087 955 ntBASIC15.33■□□□□ 0.04
SHKBP1Q8TBC3 PTPA-215ENST00000432124 567 ntTSL 4 BASIC15.33■□□□□ 0.04
SHKBP1Q8TBC3 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SHKBP1Q8TBC3 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC15.33■□□□□ 0.04
SHKBP1Q8TBC3 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC15.33■□□□□ 0.04
SHKBP1Q8TBC3 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC15.33■□□□□ 0.04
SHKBP1Q8TBC3 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
SHKBP1Q8TBC3 MEG3_2.1-201ENST00000611456 105 ntBASIC15.33■□□□□ 0.04
SHKBP1Q8TBC3 MVK-217ENST00000639206 367 ntTSL 5 BASIC15.33■□□□□ 0.04
SHKBP1Q8TBC3 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SHKBP1Q8TBC3 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SHKBP1Q8TBC3 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SHKBP1Q8TBC3 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC15.33■□□□□ 0.04
SHKBP1Q8TBC3 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
SHKBP1Q8TBC3 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC15.33■□□□□ 0.04
SHKBP1Q8TBC3 TBC1D3J-201ENST00000620719 1426 ntBASIC15.33■□□□□ 0.04
SHKBP1Q8TBC3 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SHKBP1Q8TBC3 TMBIM7P-202ENST00000641474 1516 ntBASIC15.33■□□□□ 0.04
SHKBP1Q8TBC3 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
SHKBP1Q8TBC3 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
SHKBP1Q8TBC3 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
SHKBP1Q8TBC3 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SHKBP1Q8TBC3 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SHKBP1Q8TBC3 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SHKBP1Q8TBC3 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SHKBP1Q8TBC3 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SHKBP1Q8TBC3 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SHKBP1Q8TBC3 FAS-202ENST00000352159 1722 ntTSL 5 BASIC15.32■□□□□ 0.04
SHKBP1Q8TBC3 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.32■□□□□ 0.04
SHKBP1Q8TBC3 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SHKBP1Q8TBC3 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SHKBP1Q8TBC3 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SHKBP1Q8TBC3 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
SHKBP1Q8TBC3 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SHKBP1Q8TBC3 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
SHKBP1Q8TBC3 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms