Protein–RNA interactions for Protein: Q8NB49

ATP11C, Phospholipid-transporting ATPase IG, humanhuman

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP11CQ8NB49 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ATP11CQ8NB49 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
ATP11CQ8NB49 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ATP11CQ8NB49 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ATP11CQ8NB49 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ATP11CQ8NB49 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
ATP11CQ8NB49 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ATP11CQ8NB49 BRWD1P1-201ENST00000401091 371 ntBASIC15.33■□□□□ 0.04
ATP11CQ8NB49 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC15.33■□□□□ 0.04
ATP11CQ8NB49 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC15.33■□□□□ 0.04
ATP11CQ8NB49 OLR1-203ENST00000432556 950 ntTSL 2 BASIC15.33■□□□□ 0.04
ATP11CQ8NB49 AL355994.2-201ENST00000447882 704 ntBASIC15.33■□□□□ 0.04
ATP11CQ8NB49 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC15.33■□□□□ 0.04
ATP11CQ8NB49 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC15.33■□□□□ 0.04
ATP11CQ8NB49 COX5BP1-201ENST00000507622 393 ntBASIC15.33■□□□□ 0.04
ATP11CQ8NB49 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC15.33■□□□□ 0.04
ATP11CQ8NB49 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC15.33■□□□□ 0.04
ATP11CQ8NB49 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC15.33■□□□□ 0.04
ATP11CQ8NB49 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ATP11CQ8NB49 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ATP11CQ8NB49 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC15.33■□□□□ 0.04
ATP11CQ8NB49 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC15.33■□□□□ 0.04
ATP11CQ8NB49 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC15.33■□□□□ 0.04
ATP11CQ8NB49 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC15.33■□□□□ 0.04
ATP11CQ8NB49 MIR4741-201ENST00000579822 90 ntBASIC15.33■□□□□ 0.04
ATP11CQ8NB49 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ATP11CQ8NB49 AC138466.3-201ENST00000619983 221 ntBASIC15.33■□□□□ 0.04
ATP11CQ8NB49 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC15.33■□□□□ 0.04
ATP11CQ8NB49 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ATP11CQ8NB49 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC15.33■□□□□ 0.04
ATP11CQ8NB49 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ATP11CQ8NB49 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
ATP11CQ8NB49 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC15.33■□□□□ 0.04
ATP11CQ8NB49 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ATP11CQ8NB49 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
ATP11CQ8NB49 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
ATP11CQ8NB49 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ATP11CQ8NB49 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ATP11CQ8NB49 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ATP11CQ8NB49 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC15.33■□□□□ 0.04
ATP11CQ8NB49 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC15.33■□□□□ 0.04
ATP11CQ8NB49 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ATP11CQ8NB49 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
ATP11CQ8NB49 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ATP11CQ8NB49 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC15.33■□□□□ 0.04
ATP11CQ8NB49 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
ATP11CQ8NB49 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATP11CQ8NB49 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ATP11CQ8NB49 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC15.32■□□□□ 0.04
ATP11CQ8NB49 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ATP11CQ8NB49 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
ATP11CQ8NB49 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ATP11CQ8NB49 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATP11CQ8NB49 MST1P2-201ENST00000457982 2291 ntBASIC15.32■□□□□ 0.04
ATP11CQ8NB49 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ATP11CQ8NB49 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATP11CQ8NB49 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC15.32■□□□□ 0.04
ATP11CQ8NB49 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATP11CQ8NB49 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATP11CQ8NB49 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC15.32■□□□□ 0.04
ATP11CQ8NB49 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATP11CQ8NB49 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATP11CQ8NB49 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ATP11CQ8NB49 HOMER2P2-201ENST00000451621 847 ntBASIC15.32■□□□□ 0.04
ATP11CQ8NB49 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC15.32■□□□□ 0.04
ATP11CQ8NB49 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.32■□□□□ 0.04
ATP11CQ8NB49 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC15.32■□□□□ 0.04
ATP11CQ8NB49 RN7SL560P-201ENST00000577943 264 ntBASIC15.32■□□□□ 0.04
ATP11CQ8NB49 RN7SL219P-201ENST00000582872 296 ntBASIC15.32■□□□□ 0.04
ATP11CQ8NB49 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC15.32■□□□□ 0.04
ATP11CQ8NB49 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC15.32■□□□□ 0.04
ATP11CQ8NB49 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC15.32■□□□□ 0.04
ATP11CQ8NB49 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATP11CQ8NB49 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC15.32■□□□□ 0.04
ATP11CQ8NB49 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATP11CQ8NB49 TUBB1P2-201ENST00000422712 1306 ntBASIC15.32■□□□□ 0.04
ATP11CQ8NB49 TUBB1P1-201ENST00000503144 1300 ntBASIC15.32■□□□□ 0.04
ATP11CQ8NB49 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATP11CQ8NB49 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ATP11CQ8NB49 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC15.32■□□□□ 0.04
ATP11CQ8NB49 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC15.32■□□□□ 0.04
ATP11CQ8NB49 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ATP11CQ8NB49 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATP11CQ8NB49 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATP11CQ8NB49 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
ATP11CQ8NB49 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
ATP11CQ8NB49 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATP11CQ8NB49 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
ATP11CQ8NB49 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
ATP11CQ8NB49 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ATP11CQ8NB49 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC15.32■□□□□ 0.04
ATP11CQ8NB49 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ATP11CQ8NB49 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATP11CQ8NB49 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ATP11CQ8NB49 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ATP11CQ8NB49 GOLGA8VP-201ENST00000559009 1798 ntBASIC15.31■□□□□ 0.04
ATP11CQ8NB49 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC15.31■□□□□ 0.04
ATP11CQ8NB49 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
ATP11CQ8NB49 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ATP11CQ8NB49 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms