Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM48Q8IWZ4 E2F3P2-201ENST00000447755 1422 ntBASIC14.43□□□□□ -0.1
TRIM48Q8IWZ4 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM48Q8IWZ4 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
TRIM48Q8IWZ4 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.43□□□□□ -0.1
TRIM48Q8IWZ4 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM48Q8IWZ4 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.43□□□□□ -0.1
TRIM48Q8IWZ4 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
TRIM48Q8IWZ4 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM48Q8IWZ4 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM48Q8IWZ4 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC14.43□□□□□ -0.1
TRIM48Q8IWZ4 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM48Q8IWZ4 CSH2-202ENST00000345366 598 ntTSL 5 BASIC14.43□□□□□ -0.1
TRIM48Q8IWZ4 RBM38-204ENST00000371219 760 ntTSL 2 BASIC14.43□□□□□ -0.1
TRIM48Q8IWZ4 AGER-203ENST00000375065 665 ntTSL 2 BASIC14.43□□□□□ -0.1
TRIM48Q8IWZ4 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
TRIM48Q8IWZ4 AC010141.1-201ENST00000411585 623 ntBASIC14.43□□□□□ -0.1
TRIM48Q8IWZ4 FAM58BP-201ENST00000439056 645 ntBASIC14.43□□□□□ -0.1
TRIM48Q8IWZ4 TUBB8P8-201ENST00000458717 1058 ntBASIC14.43□□□□□ -0.1
TRIM48Q8IWZ4 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC14.43□□□□□ -0.1
TRIM48Q8IWZ4 AC091804.1-201ENST00000486888 567 ntBASIC14.43□□□□□ -0.1
TRIM48Q8IWZ4 AC005740.2-201ENST00000511085 419 ntBASIC14.43□□□□□ -0.1
TRIM48Q8IWZ4 AC131206.1-201ENST00000538078 1211 ntBASIC14.43□□□□□ -0.1
TRIM48Q8IWZ4 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
TRIM48Q8IWZ4 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM48Q8IWZ4 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
TRIM48Q8IWZ4 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM48Q8IWZ4 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM48Q8IWZ4 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
TRIM48Q8IWZ4 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM48Q8IWZ4 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM48Q8IWZ4 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM48Q8IWZ4 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM48Q8IWZ4 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
TRIM48Q8IWZ4 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
TRIM48Q8IWZ4 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM48Q8IWZ4 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.43□□□□□ -0.1
TRIM48Q8IWZ4 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRIM48Q8IWZ4 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
TRIM48Q8IWZ4 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRIM48Q8IWZ4 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRIM48Q8IWZ4 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC14.42□□□□□ -0.1
TRIM48Q8IWZ4 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.42□□□□□ -0.1
TRIM48Q8IWZ4 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.42□□□□□ -0.1
TRIM48Q8IWZ4 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRIM48Q8IWZ4 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
TRIM48Q8IWZ4 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRIM48Q8IWZ4 AC018735.1-201ENST00000437208 1502 ntBASIC14.42□□□□□ -0.1
TRIM48Q8IWZ4 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
TRIM48Q8IWZ4 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.42□□□□□ -0.1
TRIM48Q8IWZ4 CICP23-201ENST00000605013 2741 ntBASIC14.42□□□□□ -0.1
TRIM48Q8IWZ4 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRIM48Q8IWZ4 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRIM48Q8IWZ4 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRIM48Q8IWZ4 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC14.42□□□□□ -0.1
TRIM48Q8IWZ4 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC14.42□□□□□ -0.1
TRIM48Q8IWZ4 SKA2-202ENST00000437036 625 ntTSL 2 BASIC14.42□□□□□ -0.1
TRIM48Q8IWZ4 PUDPP3-201ENST00000445368 636 ntBASIC14.42□□□□□ -0.1
TRIM48Q8IWZ4 EIF4HP1-201ENST00000453115 687 ntBASIC14.42□□□□□ -0.1
TRIM48Q8IWZ4 RNMTL1P1-201ENST00000454103 560 ntBASIC14.42□□□□□ -0.1
TRIM48Q8IWZ4 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC14.42□□□□□ -0.1
TRIM48Q8IWZ4 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC14.42□□□□□ -0.1
TRIM48Q8IWZ4 SERPINA13P-202ENST00000478994 924 ntBASIC14.42□□□□□ -0.1
TRIM48Q8IWZ4 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRIM48Q8IWZ4 ALG3P1-201ENST00000508806 1114 ntBASIC14.42□□□□□ -0.1
TRIM48Q8IWZ4 SCARNA20.5-201ENST00000516991 142 ntBASIC14.42□□□□□ -0.1
TRIM48Q8IWZ4 HNRNPA1P36-201ENST00000521313 955 ntBASIC14.42□□□□□ -0.1
TRIM48Q8IWZ4 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC14.42□□□□□ -0.1
TRIM48Q8IWZ4 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC14.42□□□□□ -0.1
TRIM48Q8IWZ4 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRIM48Q8IWZ4 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
TRIM48Q8IWZ4 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRIM48Q8IWZ4 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.42□□□□□ -0.1
TRIM48Q8IWZ4 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
TRIM48Q8IWZ4 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRIM48Q8IWZ4 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRIM48Q8IWZ4 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRIM48Q8IWZ4 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.42□□□□□ -0.1
TRIM48Q8IWZ4 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRIM48Q8IWZ4 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRIM48Q8IWZ4 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRIM48Q8IWZ4 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRIM48Q8IWZ4 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRIM48Q8IWZ4 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14.41□□□□□ -0.1
TRIM48Q8IWZ4 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRIM48Q8IWZ4 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
TRIM48Q8IWZ4 AC005840.4-201ENST00000541242 2494 ntBASIC14.41□□□□□ -0.1
TRIM48Q8IWZ4 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC14.41□□□□□ -0.1
TRIM48Q8IWZ4 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.41□□□□□ -0.1
TRIM48Q8IWZ4 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRIM48Q8IWZ4 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRIM48Q8IWZ4 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.41□□□□□ -0.1
TRIM48Q8IWZ4 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
TRIM48Q8IWZ4 GRK6P1-201ENST00000400595 1711 ntBASIC14.41□□□□□ -0.1
TRIM48Q8IWZ4 AC007292.2-201ENST00000593524 1812 ntBASIC14.41□□□□□ -0.1
TRIM48Q8IWZ4 AC092135.3-201ENST00000624151 1846 ntBASIC14.41□□□□□ -0.1
TRIM48Q8IWZ4 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
TRIM48Q8IWZ4 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
TRIM48Q8IWZ4 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.41□□□□□ -0.1
TRIM48Q8IWZ4 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms