Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
NPAS4Q8IUM7 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
NPAS4Q8IUM7 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
NPAS4Q8IUM7 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NPAS4Q8IUM7 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC15.47■□□□□ 0.07
NPAS4Q8IUM7 AC013268.4-201ENST00000637413 2228 ntBASIC15.47■□□□□ 0.07
NPAS4Q8IUM7 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
NPAS4Q8IUM7 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.47■□□□□ 0.07
NPAS4Q8IUM7 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
NPAS4Q8IUM7 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
NPAS4Q8IUM7 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
NPAS4Q8IUM7 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NPAS4Q8IUM7 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC15.47■□□□□ 0.07
NPAS4Q8IUM7 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
NPAS4Q8IUM7 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
NPAS4Q8IUM7 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
NPAS4Q8IUM7 CELP-201ENST00000411440 1249 ntTSL 5 BASIC15.47■□□□□ 0.07
NPAS4Q8IUM7 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC15.47■□□□□ 0.07
NPAS4Q8IUM7 RPL35P9-201ENST00000446059 350 ntBASIC15.47■□□□□ 0.07
NPAS4Q8IUM7 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC15.47■□□□□ 0.07
NPAS4Q8IUM7 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
NPAS4Q8IUM7 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
NPAS4Q8IUM7 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC15.47■□□□□ 0.07
NPAS4Q8IUM7 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC15.47■□□□□ 0.07
NPAS4Q8IUM7 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC15.47■□□□□ 0.07
NPAS4Q8IUM7 C2orf69P1-201ENST00000563532 1093 ntBASIC15.47■□□□□ 0.07
NPAS4Q8IUM7 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC15.47■□□□□ 0.07
NPAS4Q8IUM7 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC15.47■□□□□ 0.07
NPAS4Q8IUM7 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
NPAS4Q8IUM7 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
NPAS4Q8IUM7 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.47■□□□□ 0.07
NPAS4Q8IUM7 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC15.47■□□□□ 0.07
NPAS4Q8IUM7 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
NPAS4Q8IUM7 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NPAS4Q8IUM7 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NPAS4Q8IUM7 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NPAS4Q8IUM7 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.47■□□□□ 0.07
NPAS4Q8IUM7 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NPAS4Q8IUM7 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC15.47■□□□□ 0.07
NPAS4Q8IUM7 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
NPAS4Q8IUM7 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NPAS4Q8IUM7 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
NPAS4Q8IUM7 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NPAS4Q8IUM7 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC15.47■□□□□ 0.07
NPAS4Q8IUM7 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.47■□□□□ 0.07
NPAS4Q8IUM7 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
NPAS4Q8IUM7 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NPAS4Q8IUM7 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
NPAS4Q8IUM7 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
NPAS4Q8IUM7 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
NPAS4Q8IUM7 MYADML-201ENST00000474610 2147 ntBASIC15.46■□□□□ 0.07
NPAS4Q8IUM7 AC018529.2-202ENST00000611482 3087 ntBASIC15.46■□□□□ 0.07
NPAS4Q8IUM7 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
NPAS4Q8IUM7 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
NPAS4Q8IUM7 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NPAS4Q8IUM7 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC15.46■□□□□ 0.07
NPAS4Q8IUM7 MIR1227-201ENST00000408484 88 ntBASIC15.46■□□□□ 0.07
NPAS4Q8IUM7 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NPAS4Q8IUM7 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NPAS4Q8IUM7 AC006987.1-201ENST00000413610 527 ntBASIC15.46■□□□□ 0.07
NPAS4Q8IUM7 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC15.46■□□□□ 0.07
NPAS4Q8IUM7 RGS5-216ENST00000449680 788 ntTSL 3 BASIC15.46■□□□□ 0.07
NPAS4Q8IUM7 SCARNA12-201ENST00000459155 270 ntBASIC15.46■□□□□ 0.07
NPAS4Q8IUM7 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC15.46■□□□□ 0.07
NPAS4Q8IUM7 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC15.46■□□□□ 0.07
NPAS4Q8IUM7 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC15.46■□□□□ 0.07
NPAS4Q8IUM7 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC15.46■□□□□ 0.07
NPAS4Q8IUM7 AC141586.1-203ENST00000567242 366 ntBASIC15.46■□□□□ 0.07
NPAS4Q8IUM7 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC15.46■□□□□ 0.07
NPAS4Q8IUM7 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC15.46■□□□□ 0.07
NPAS4Q8IUM7 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC15.46■□□□□ 0.07
NPAS4Q8IUM7 FO393412.1-201ENST00000619841 382 ntBASIC15.46■□□□□ 0.07
NPAS4Q8IUM7 AC138466.4-201ENST00000623965 852 ntBASIC15.46■□□□□ 0.07
NPAS4Q8IUM7 AC002044.2-201ENST00000624910 970 ntBASIC15.46■□□□□ 0.07
NPAS4Q8IUM7 AJ011931.1-201ENST00000618749 2492 ntBASIC15.46■□□□□ 0.07
NPAS4Q8IUM7 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
NPAS4Q8IUM7 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.46■□□□□ 0.07
NPAS4Q8IUM7 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.46■□□□□ 0.07
NPAS4Q8IUM7 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NPAS4Q8IUM7 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NPAS4Q8IUM7 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
NPAS4Q8IUM7 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC15.46■□□□□ 0.07
NPAS4Q8IUM7 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC15.46■□□□□ 0.06
NPAS4Q8IUM7 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC15.46■□□□□ 0.06
NPAS4Q8IUM7 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
NPAS4Q8IUM7 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC15.46■□□□□ 0.06
NPAS4Q8IUM7 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
NPAS4Q8IUM7 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
NPAS4Q8IUM7 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NPAS4Q8IUM7 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NPAS4Q8IUM7 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NPAS4Q8IUM7 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
NPAS4Q8IUM7 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
NPAS4Q8IUM7 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
NPAS4Q8IUM7 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NPAS4Q8IUM7 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NPAS4Q8IUM7 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NPAS4Q8IUM7 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NPAS4Q8IUM7 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
NPAS4Q8IUM7 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms