Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RTTNQ86VV8 AC012617.1-204ENST00000586340 2305 ntBASIC13.03□□□□□ -0.32
RTTNQ86VV8 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.03□□□□□ -0.32
RTTNQ86VV8 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RTTNQ86VV8 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RTTNQ86VV8 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RTTNQ86VV8 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RTTNQ86VV8 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RTTNQ86VV8 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC13.03□□□□□ -0.32
RTTNQ86VV8 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC13.03□□□□□ -0.32
RTTNQ86VV8 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.03□□□□□ -0.32
RTTNQ86VV8 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC13.03□□□□□ -0.32
RTTNQ86VV8 RN7SL769P-201ENST00000469386 295 ntBASIC13.03□□□□□ -0.32
RTTNQ86VV8 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RTTNQ86VV8 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC13.03□□□□□ -0.32
RTTNQ86VV8 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC13.03□□□□□ -0.32
RTTNQ86VV8 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
RTTNQ86VV8 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC13.03□□□□□ -0.32
RTTNQ86VV8 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC13.03□□□□□ -0.32
RTTNQ86VV8 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC13.03□□□□□ -0.32
RTTNQ86VV8 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RTTNQ86VV8 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC13.03□□□□□ -0.32
RTTNQ86VV8 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC13.03□□□□□ -0.32
RTTNQ86VV8 AC010328.2-201ENST00000597698 1111 ntBASIC13.03□□□□□ -0.32
RTTNQ86VV8 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC13.03□□□□□ -0.32
RTTNQ86VV8 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
RTTNQ86VV8 AC073413.1-201ENST00000603927 732 ntBASIC13.03□□□□□ -0.32
RTTNQ86VV8 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC13.03□□□□□ -0.32
RTTNQ86VV8 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RTTNQ86VV8 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
RTTNQ86VV8 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC13.03□□□□□ -0.32
RTTNQ86VV8 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
RTTNQ86VV8 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
RTTNQ86VV8 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RTTNQ86VV8 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
RTTNQ86VV8 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC13.03□□□□□ -0.32
RTTNQ86VV8 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RTTNQ86VV8 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.03□□□□□ -0.32
RTTNQ86VV8 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RTTNQ86VV8 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RTTNQ86VV8 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
RTTNQ86VV8 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RTTNQ86VV8 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RTTNQ86VV8 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RTTNQ86VV8 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
RTTNQ86VV8 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.03□□□□□ -0.32
RTTNQ86VV8 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
RTTNQ86VV8 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.03□□□□□ -0.32
RTTNQ86VV8 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RTTNQ86VV8 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC13.03□□□□□ -0.32
RTTNQ86VV8 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RTTNQ86VV8 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.03□□□□□ -0.32
RTTNQ86VV8 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RTTNQ86VV8 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.03□□□□□ -0.32
RTTNQ86VV8 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.03□□□□□ -0.32
RTTNQ86VV8 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RTTNQ86VV8 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.03□□□□□ -0.32
RTTNQ86VV8 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RTTNQ86VV8 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RTTNQ86VV8 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RTTNQ86VV8 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
RTTNQ86VV8 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
RTTNQ86VV8 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.03□□□□□ -0.32
RTTNQ86VV8 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RTTNQ86VV8 AL590640.2-201ENST00000457038 527 ntBASIC13.03□□□□□ -0.32
RTTNQ86VV8 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC13.03□□□□□ -0.32
RTTNQ86VV8 PTK2-225ENST00000520892 571 ntTSL 4 BASIC13.03□□□□□ -0.32
RTTNQ86VV8 RPL8-205ENST00000527914 551 ntTSL 3 BASIC13.03□□□□□ -0.32
RTTNQ86VV8 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC13.03□□□□□ -0.32
RTTNQ86VV8 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC13.03□□□□□ -0.32
RTTNQ86VV8 MEX3B-202ENST00000558133 4333 ntBASIC13.02□□□□□ -0.32
RTTNQ86VV8 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC13.02□□□□□ -0.32
RTTNQ86VV8 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
RTTNQ86VV8 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
RTTNQ86VV8 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
RTTNQ86VV8 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
RTTNQ86VV8 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
RTTNQ86VV8 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
RTTNQ86VV8 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
RTTNQ86VV8 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
RTTNQ86VV8 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
RTTNQ86VV8 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RTTNQ86VV8 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
RTTNQ86VV8 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
RTTNQ86VV8 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.02□□□□□ -0.33
RTTNQ86VV8 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
RTTNQ86VV8 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RTTNQ86VV8 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC13.02□□□□□ -0.33
RTTNQ86VV8 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
RTTNQ86VV8 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
RTTNQ86VV8 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC13.02□□□□□ -0.33
RTTNQ86VV8 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC13.02□□□□□ -0.33
RTTNQ86VV8 FAM8A4P-201ENST00000435433 1213 ntBASIC13.02□□□□□ -0.33
RTTNQ86VV8 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.02□□□□□ -0.33
RTTNQ86VV8 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RTTNQ86VV8 AC106820.3-201ENST00000561653 397 ntBASIC13.02□□□□□ -0.33
RTTNQ86VV8 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC13.02□□□□□ -0.33
RTTNQ86VV8 AL358472.3-201ENST00000608147 415 ntBASIC13.02□□□□□ -0.33
RTTNQ86VV8 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC13.02□□□□□ -0.33
RTTNQ86VV8 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms