Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.89□□□□□ -0.03
PACS2Q86VP3 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.89□□□□□ -0.03
PACS2Q86VP3 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.89□□□□□ -0.03
PACS2Q86VP3 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC14.89□□□□□ -0.03
PACS2Q86VP3 HGNC:18790-207ENST00000505246 973 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
PACS2Q86VP3 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.89□□□□□ -0.03
PACS2Q86VP3 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.89□□□□□ -0.03
PACS2Q86VP3 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.89□□□□□ -0.03
PACS2Q86VP3 AC079414.2-201ENST00000567157 1104 ntBASIC14.89□□□□□ -0.03
PACS2Q86VP3 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC14.89□□□□□ -0.03
PACS2Q86VP3 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.89□□□□□ -0.03
PACS2Q86VP3 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.89□□□□□ -0.03
PACS2Q86VP3 AC022400.8-201ENST00000623453 3599 ntBASIC14.89□□□□□ -0.03
PACS2Q86VP3 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PACS2Q86VP3 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PACS2Q86VP3 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PACS2Q86VP3 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PACS2Q86VP3 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PACS2Q86VP3 FAM102A-202ENST00000373084 3352 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PACS2Q86VP3 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.89□□□□□ -0.03
PACS2Q86VP3 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PACS2Q86VP3 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PACS2Q86VP3 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PACS2Q86VP3 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PACS2Q86VP3 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
PACS2Q86VP3 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PACS2Q86VP3 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.89□□□□□ -0.03
PACS2Q86VP3 PAX8-202ENST00000263335 3735 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PACS2Q86VP3 NR4A1-201ENST00000243050 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PACS2Q86VP3 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.89□□□□□ -0.03
PACS2Q86VP3 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC14.88□□□□□ -0.03
PACS2Q86VP3 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PACS2Q86VP3 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC14.88□□□□□ -0.03
PACS2Q86VP3 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
PACS2Q86VP3 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.88□□□□□ -0.03
PACS2Q86VP3 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.88□□□□□ -0.03
PACS2Q86VP3 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC14.88□□□□□ -0.03
PACS2Q86VP3 DPP3-211ENST00000532677 3078 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PACS2Q86VP3 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
PACS2Q86VP3 TMOD1-202ENST00000375175 2516 ntTSL 2 BASIC14.88□□□□□ -0.03
PACS2Q86VP3 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PACS2Q86VP3 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PACS2Q86VP3 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
PACS2Q86VP3 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.88□□□□□ -0.03
PACS2Q86VP3 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
PACS2Q86VP3 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC14.88□□□□□ -0.03
PACS2Q86VP3 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PACS2Q86VP3 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PACS2Q86VP3 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC14.88□□□□□ -0.03
PACS2Q86VP3 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
PACS2Q86VP3 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.88□□□□□ -0.03
PACS2Q86VP3 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PACS2Q86VP3 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC14.88□□□□□ -0.03
PACS2Q86VP3 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.88□□□□□ -0.03
PACS2Q86VP3 AC051619.7-201ENST00000568314 623 ntBASIC14.88□□□□□ -0.03
PACS2Q86VP3 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.88□□□□□ -0.03
PACS2Q86VP3 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.88□□□□□ -0.03
PACS2Q86VP3 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.88□□□□□ -0.03
PACS2Q86VP3 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.88□□□□□ -0.03
PACS2Q86VP3 AC007967.4-201ENST00000614700 386 ntBASIC14.88□□□□□ -0.03
PACS2Q86VP3 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.88□□□□□ -0.03
PACS2Q86VP3 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PACS2Q86VP3 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
PACS2Q86VP3 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
PACS2Q86VP3 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
PACS2Q86VP3 AC027369.3-201ENST00000530465 3707 ntBASIC14.88□□□□□ -0.03
PACS2Q86VP3 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PACS2Q86VP3 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PACS2Q86VP3 ZFAND3-203ENST00000373391 3001 ntTSL 5 BASIC14.88□□□□□ -0.03
PACS2Q86VP3 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PACS2Q86VP3 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PACS2Q86VP3 ADAM32-206ENST00000519315 2168 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PACS2Q86VP3 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.88□□□□□ -0.03
PACS2Q86VP3 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PACS2Q86VP3 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PACS2Q86VP3 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PACS2Q86VP3 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
PACS2Q86VP3 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
PACS2Q86VP3 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PACS2Q86VP3 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
PACS2Q86VP3 POMT1-203ENST00000372228 3123 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PACS2Q86VP3 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
PACS2Q86VP3 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PACS2Q86VP3 HERC6-202ENST00000273960 3473 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PACS2Q86VP3 GAS8-220ENST00000620723 3308 ntTSL 2 BASIC14.87□□□□□ -0.03
PACS2Q86VP3 CASS4-202ENST00000434344 2888 ntTSL 2 BASIC14.87□□□□□ -0.03
PACS2Q86VP3 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
PACS2Q86VP3 FOXN3-219ENST00000615335 2421 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
PACS2Q86VP3 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
PACS2Q86VP3 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.87□□□□□ -0.03
PACS2Q86VP3 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.87□□□□□ -0.03
PACS2Q86VP3 TCAM1P-207ENST00000485295 1537 ntBASIC14.87□□□□□ -0.03
PACS2Q86VP3 AL035456.1-201ENST00000456064 1369 ntBASIC14.87□□□□□ -0.03
PACS2Q86VP3 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
PACS2Q86VP3 IFT122-204ENST00000349441 3569 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PACS2Q86VP3 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
PACS2Q86VP3 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC14.87□□□□□ -0.03
PACS2Q86VP3 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.87□□□□□ -0.03
PACS2Q86VP3 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PACS2Q86VP3 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms