Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
ZNF546Q86UE3 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ZNF546Q86UE3 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
ZNF546Q86UE3 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC12.22□□□□□ -0.45
ZNF546Q86UE3 AGAP12P-201ENST00000585227 2359 ntBASIC12.22□□□□□ -0.45
ZNF546Q86UE3 AP001972.5-201ENST00000624624 2338 ntBASIC12.22□□□□□ -0.45
ZNF546Q86UE3 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
ZNF546Q86UE3 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
ZNF546Q86UE3 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ZNF546Q86UE3 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
ZNF546Q86UE3 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ZNF546Q86UE3 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
ZNF546Q86UE3 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC12.22□□□□□ -0.45
ZNF546Q86UE3 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC12.22□□□□□ -0.45
ZNF546Q86UE3 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
ZNF546Q86UE3 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC12.22□□□□□ -0.45
ZNF546Q86UE3 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ZNF546Q86UE3 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ZNF546Q86UE3 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC12.21□□□□□ -0.45
ZNF546Q86UE3 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC12.21□□□□□ -0.45
ZNF546Q86UE3 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
ZNF546Q86UE3 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
ZNF546Q86UE3 AL157414.3-201ENST00000624276 1954 ntBASIC12.21□□□□□ -0.45
ZNF546Q86UE3 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ZNF546Q86UE3 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ZNF546Q86UE3 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
ZNF546Q86UE3 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ZNF546Q86UE3 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC12.21□□□□□ -0.45
ZNF546Q86UE3 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
ZNF546Q86UE3 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ZNF546Q86UE3 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
ZNF546Q86UE3 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ZNF546Q86UE3 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ZNF546Q86UE3 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ZNF546Q86UE3 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC12.21□□□□□ -0.45
ZNF546Q86UE3 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC12.21□□□□□ -0.45
ZNF546Q86UE3 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ZNF546Q86UE3 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ZNF546Q86UE3 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
ZNF546Q86UE3 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
ZNF546Q86UE3 HPD-204ENST00000543163 1709 ntTSL 5 BASIC12.21□□□□□ -0.45
ZNF546Q86UE3 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
ZNF546Q86UE3 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ZNF546Q86UE3 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC12.21□□□□□ -0.45
ZNF546Q86UE3 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
ZNF546Q86UE3 HNRNPA1P28-201ENST00000424481 961 ntBASIC12.21□□□□□ -0.45
ZNF546Q86UE3 AL671277.1-201ENST00000429656 993 ntBASIC12.21□□□□□ -0.45
ZNF546Q86UE3 TARDBPP1-201ENST00000442013 1203 ntBASIC12.21□□□□□ -0.45
ZNF546Q86UE3 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
ZNF546Q86UE3 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC12.21□□□□□ -0.45
ZNF546Q86UE3 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
ZNF546Q86UE3 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
ZNF546Q86UE3 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC12.21□□□□□ -0.45
ZNF546Q86UE3 RN7SL510P-201ENST00000581311 263 ntBASIC12.21□□□□□ -0.45
ZNF546Q86UE3 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC12.21□□□□□ -0.45
ZNF546Q86UE3 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC12.21□□□□□ -0.45
ZNF546Q86UE3 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC12.21□□□□□ -0.45
ZNF546Q86UE3 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
ZNF546Q86UE3 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
ZNF546Q86UE3 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
ZNF546Q86UE3 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
ZNF546Q86UE3 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
ZNF546Q86UE3 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
ZNF546Q86UE3 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
ZNF546Q86UE3 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
ZNF546Q86UE3 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC12.21□□□□□ -0.46
ZNF546Q86UE3 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
ZNF546Q86UE3 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
ZNF546Q86UE3 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
ZNF546Q86UE3 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC12.21□□□□□ -0.46
ZNF546Q86UE3 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
ZNF546Q86UE3 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
ZNF546Q86UE3 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
ZNF546Q86UE3 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC12.21□□□□□ -0.46
ZNF546Q86UE3 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
ZNF546Q86UE3 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
ZNF546Q86UE3 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
ZNF546Q86UE3 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
ZNF546Q86UE3 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC12.2□□□□□ -0.46
ZNF546Q86UE3 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ZNF546Q86UE3 PLEKHB2-202ENST00000403716 4349 ntTSL 3 BASIC12.2□□□□□ -0.46
ZNF546Q86UE3 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ZNF546Q86UE3 AC104109.2-201ENST00000602919 1418 ntBASIC12.2□□□□□ -0.46
ZNF546Q86UE3 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC12.2□□□□□ -0.46
ZNF546Q86UE3 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ZNF546Q86UE3 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
ZNF546Q86UE3 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
ZNF546Q86UE3 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ZNF546Q86UE3 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ZNF546Q86UE3 KRT8P35-201ENST00000483942 1338 ntBASIC12.2□□□□□ -0.46
ZNF546Q86UE3 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ZNF546Q86UE3 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ZNF546Q86UE3 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ZNF546Q86UE3 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ZNF546Q86UE3 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC12.2□□□□□ -0.46
ZNF546Q86UE3 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
ZNF546Q86UE3 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC12.2□□□□□ -0.46
ZNF546Q86UE3 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
ZNF546Q86UE3 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
ZNF546Q86UE3 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms