Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 TCAF1P1-201ENST00000414990 2232 ntBASIC16.67■□□□□ 0.26
ATL3Q6DD88 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC16.67■□□□□ 0.26
ATL3Q6DD88 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATL3Q6DD88 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ATL3Q6DD88 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
ATL3Q6DD88 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATL3Q6DD88 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
ATL3Q6DD88 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ATL3Q6DD88 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATL3Q6DD88 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC16.67■□□□□ 0.26
ATL3Q6DD88 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATL3Q6DD88 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ATL3Q6DD88 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATL3Q6DD88 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATL3Q6DD88 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC16.67■□□□□ 0.26
ATL3Q6DD88 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATL3Q6DD88 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
ATL3Q6DD88 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC16.66■□□□□ 0.26
ATL3Q6DD88 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC16.66■□□□□ 0.26
ATL3Q6DD88 AC072061.1-201ENST00000569710 2234 ntBASIC16.66■□□□□ 0.26
ATL3Q6DD88 FAM90A12P-201ENST00000519497 2375 ntBASIC16.66■□□□□ 0.26
ATL3Q6DD88 FAM90A24P-201ENST00000520792 2369 ntBASIC16.66■□□□□ 0.26
ATL3Q6DD88 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ATL3Q6DD88 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC16.66■□□□□ 0.26
ATL3Q6DD88 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATL3Q6DD88 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
ATL3Q6DD88 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
ATL3Q6DD88 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATL3Q6DD88 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATL3Q6DD88 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATL3Q6DD88 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
ATL3Q6DD88 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATL3Q6DD88 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.66■□□□□ 0.26
ATL3Q6DD88 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
ATL3Q6DD88 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC16.66■□□□□ 0.26
ATL3Q6DD88 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC16.66■□□□□ 0.26
ATL3Q6DD88 TERF1P3-201ENST00000505638 1227 ntBASIC16.66■□□□□ 0.26
ATL3Q6DD88 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
ATL3Q6DD88 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC16.66■□□□□ 0.26
ATL3Q6DD88 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC16.66■□□□□ 0.26
ATL3Q6DD88 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC16.66■□□□□ 0.26
ATL3Q6DD88 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ATL3Q6DD88 AL358472.3-201ENST00000608147 415 ntBASIC16.66■□□□□ 0.26
ATL3Q6DD88 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC16.66■□□□□ 0.26
ATL3Q6DD88 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC16.66■□□□□ 0.26
ATL3Q6DD88 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC16.66■□□□□ 0.26
ATL3Q6DD88 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC16.66■□□□□ 0.26
ATL3Q6DD88 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC16.66■□□□□ 0.26
ATL3Q6DD88 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATL3Q6DD88 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ATL3Q6DD88 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATL3Q6DD88 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC16.66■□□□□ 0.26
ATL3Q6DD88 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATL3Q6DD88 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATL3Q6DD88 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATL3Q6DD88 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
ATL3Q6DD88 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
ATL3Q6DD88 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATL3Q6DD88 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATL3Q6DD88 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATL3Q6DD88 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
ATL3Q6DD88 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
ATL3Q6DD88 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC16.65■□□□□ 0.26
ATL3Q6DD88 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
ATL3Q6DD88 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ATL3Q6DD88 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATL3Q6DD88 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ATL3Q6DD88 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATL3Q6DD88 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATL3Q6DD88 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATL3Q6DD88 ZBTB12BP-201ENST00000314232 1122 ntBASIC16.65■□□□□ 0.26
ATL3Q6DD88 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ATL3Q6DD88 EDF1-203ENST00000371649 790 ntTSL 2 BASIC16.65■□□□□ 0.26
ATL3Q6DD88 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ATL3Q6DD88 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.65■□□□□ 0.26
ATL3Q6DD88 RPL28-204ENST00000431533 590 ntTSL 2 BASIC16.65■□□□□ 0.26
ATL3Q6DD88 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC16.65■□□□□ 0.26
ATL3Q6DD88 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ATL3Q6DD88 AC007389.4-201ENST00000454674 793 ntBASIC16.65■□□□□ 0.26
ATL3Q6DD88 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.65■□□□□ 0.26
ATL3Q6DD88 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
ATL3Q6DD88 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC16.65■□□□□ 0.26
ATL3Q6DD88 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.65■□□□□ 0.26
ATL3Q6DD88 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16.65■□□□□ 0.26
ATL3Q6DD88 MIR4683-201ENST00000579659 81 ntBASIC16.65■□□□□ 0.26
ATL3Q6DD88 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ATL3Q6DD88 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC16.65■□□□□ 0.26
ATL3Q6DD88 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATL3Q6DD88 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATL3Q6DD88 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC16.65■□□□□ 0.26
ATL3Q6DD88 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATL3Q6DD88 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATL3Q6DD88 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATL3Q6DD88 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATL3Q6DD88 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
ATL3Q6DD88 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ATL3Q6DD88 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC16.65■□□□□ 0.26
ATL3Q6DD88 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ATL3Q6DD88 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC16.65■□□□□ 0.26
ATL3Q6DD88 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms