Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC16.88■□□□□ 0.29
SHROOM1Q2M3G4 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.88■□□□□ 0.29
SHROOM1Q2M3G4 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SHROOM1Q2M3G4 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SHROOM1Q2M3G4 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SHROOM1Q2M3G4 CYP51A1P3-201ENST00000400072 1428 ntBASIC16.88■□□□□ 0.29
SHROOM1Q2M3G4 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SHROOM1Q2M3G4 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
SHROOM1Q2M3G4 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
SHROOM1Q2M3G4 CICP24-201ENST00000605464 2705 ntBASIC16.88■□□□□ 0.29
SHROOM1Q2M3G4 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
SHROOM1Q2M3G4 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC16.88■□□□□ 0.29
SHROOM1Q2M3G4 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
SHROOM1Q2M3G4 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
SHROOM1Q2M3G4 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
SHROOM1Q2M3G4 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SHROOM1Q2M3G4 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SHROOM1Q2M3G4 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC16.88■□□□□ 0.29
SHROOM1Q2M3G4 Z69890.1-201ENST00000382990 339 ntBASIC16.88■□□□□ 0.29
SHROOM1Q2M3G4 HIST2H2BA-201ENST00000412169 381 ntBASIC16.88■□□□□ 0.29
SHROOM1Q2M3G4 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
SHROOM1Q2M3G4 CHCHD2P9-201ENST00000461726 456 ntBASIC16.88■□□□□ 0.29
SHROOM1Q2M3G4 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC16.88■□□□□ 0.29
SHROOM1Q2M3G4 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC16.88■□□□□ 0.29
SHROOM1Q2M3G4 KRT8P1-201ENST00000557533 1207 ntBASIC16.88■□□□□ 0.29
SHROOM1Q2M3G4 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC16.88■□□□□ 0.29
SHROOM1Q2M3G4 DRG2-220ENST00000583355 891 ntTSL 3 BASIC16.88■□□□□ 0.29
SHROOM1Q2M3G4 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC16.88■□□□□ 0.29
SHROOM1Q2M3G4 GMFG-209ENST00000600322 622 ntTSL 5 BASIC16.88■□□□□ 0.29
SHROOM1Q2M3G4 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC16.88■□□□□ 0.29
SHROOM1Q2M3G4 AGGF1P1-201ENST00000509500 2073 ntBASIC16.88■□□□□ 0.29
SHROOM1Q2M3G4 AC232323.1-201ENST00000540724 2099 ntBASIC16.88■□□□□ 0.29
SHROOM1Q2M3G4 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SHROOM1Q2M3G4 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SHROOM1Q2M3G4 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC16.88■□□□□ 0.29
SHROOM1Q2M3G4 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SHROOM1Q2M3G4 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SHROOM1Q2M3G4 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
SHROOM1Q2M3G4 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SHROOM1Q2M3G4 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SHROOM1Q2M3G4 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC16.88■□□□□ 0.29
SHROOM1Q2M3G4 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SHROOM1Q2M3G4 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SHROOM1Q2M3G4 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SHROOM1Q2M3G4 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SHROOM1Q2M3G4 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SHROOM1Q2M3G4 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SHROOM1Q2M3G4 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.87■□□□□ 0.29
SHROOM1Q2M3G4 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SHROOM1Q2M3G4 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
SHROOM1Q2M3G4 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
SHROOM1Q2M3G4 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SHROOM1Q2M3G4 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC16.87■□□□□ 0.29
SHROOM1Q2M3G4 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SHROOM1Q2M3G4 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SHROOM1Q2M3G4 AL355334.1-201ENST00000417713 215 ntBASIC16.87■□□□□ 0.29
SHROOM1Q2M3G4 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC16.87■□□□□ 0.29
SHROOM1Q2M3G4 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SHROOM1Q2M3G4 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC16.87■□□□□ 0.29
SHROOM1Q2M3G4 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC16.87■□□□□ 0.29
SHROOM1Q2M3G4 CTBP2P4-201ENST00000513884 920 ntBASIC16.87■□□□□ 0.29
SHROOM1Q2M3G4 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SHROOM1Q2M3G4 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC16.87■□□□□ 0.29
SHROOM1Q2M3G4 TPM1-223ENST00000560445 485 ntTSL 3 BASIC16.87■□□□□ 0.29
SHROOM1Q2M3G4 ELP5-212ENST00000574255 671 ntTSL 2 BASIC16.87■□□□□ 0.29
SHROOM1Q2M3G4 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC16.87■□□□□ 0.29
SHROOM1Q2M3G4 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC16.87■□□□□ 0.29
SHROOM1Q2M3G4 MIR6858-201ENST00000620733 67 ntBASIC16.87■□□□□ 0.29
SHROOM1Q2M3G4 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SHROOM1Q2M3G4 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
SHROOM1Q2M3G4 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SHROOM1Q2M3G4 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SHROOM1Q2M3G4 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
SHROOM1Q2M3G4 AC097359.2-201ENST00000604992 2389 ntBASIC16.87■□□□□ 0.29
SHROOM1Q2M3G4 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
SHROOM1Q2M3G4 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC16.86■□□□□ 0.29
SHROOM1Q2M3G4 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHROOM1Q2M3G4 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
SHROOM1Q2M3G4 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHROOM1Q2M3G4 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHROOM1Q2M3G4 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHROOM1Q2M3G4 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
SHROOM1Q2M3G4 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHROOM1Q2M3G4 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHROOM1Q2M3G4 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHROOM1Q2M3G4 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHROOM1Q2M3G4 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHROOM1Q2M3G4 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHROOM1Q2M3G4 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHROOM1Q2M3G4 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHROOM1Q2M3G4 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHROOM1Q2M3G4 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC16.86■□□□□ 0.29
SHROOM1Q2M3G4 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
SHROOM1Q2M3G4 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHROOM1Q2M3G4 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHROOM1Q2M3G4 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHROOM1Q2M3G4 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC16.86■□□□□ 0.29
SHROOM1Q2M3G4 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC16.86■□□□□ 0.29
SHROOM1Q2M3G4 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC16.86■□□□□ 0.29
SHROOM1Q2M3G4 RPL7P35-201ENST00000446943 740 ntBASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms