Protein–RNA interactions for Protein: Q12772

SREBF2, Sterol regulatory element-binding protein 2, humanhuman

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2Q12772 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SREBF2Q12772 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC16.41■□□□□ 0.22
SREBF2Q12772 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
SREBF2Q12772 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SREBF2Q12772 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SREBF2Q12772 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SREBF2Q12772 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC16.41■□□□□ 0.22
SREBF2Q12772 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC16.41■□□□□ 0.22
SREBF2Q12772 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SREBF2Q12772 SIRPB3P-201ENST00000340424 1216 ntBASIC16.41■□□□□ 0.22
SREBF2Q12772 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SREBF2Q12772 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
SREBF2Q12772 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
SREBF2Q12772 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC16.41■□□□□ 0.22
SREBF2Q12772 AL137244.1-201ENST00000422931 865 ntBASIC16.41■□□□□ 0.22
SREBF2Q12772 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC16.41■□□□□ 0.22
SREBF2Q12772 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
SREBF2Q12772 RPS18P9-201ENST00000482817 460 ntBASIC16.41■□□□□ 0.22
SREBF2Q12772 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC16.41■□□□□ 0.22
SREBF2Q12772 MIR2278-201ENST00000516344 96 ntBASIC16.41■□□□□ 0.22
SREBF2Q12772 BAK1P2-201ENST00000532665 631 ntBASIC16.41■□□□□ 0.22
SREBF2Q12772 PMEL-214ENST00000550447 901 ntTSL 3 BASIC16.41■□□□□ 0.22
SREBF2Q12772 SRP14-208ENST00000560773 468 ntTSL 3 BASIC16.41■□□□□ 0.22
SREBF2Q12772 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
SREBF2Q12772 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC16.41■□□□□ 0.22
SREBF2Q12772 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
SREBF2Q12772 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC16.41■□□□□ 0.22
SREBF2Q12772 URAHP-205ENST00000610227 398 ntBASIC16.41■□□□□ 0.22
SREBF2Q12772 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
SREBF2Q12772 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SREBF2Q12772 CICP23-201ENST00000605013 2741 ntBASIC16.41■□□□□ 0.22
SREBF2Q12772 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SREBF2Q12772 NNMT-203ENST00000535401 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SREBF2Q12772 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SREBF2Q12772 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SREBF2Q12772 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SREBF2Q12772 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SREBF2Q12772 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SREBF2Q12772 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC16.41■□□□□ 0.22
SREBF2Q12772 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC16.41■□□□□ 0.22
SREBF2Q12772 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SREBF2Q12772 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
SREBF2Q12772 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SREBF2Q12772 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SREBF2Q12772 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SREBF2Q12772 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.4■□□□□ 0.22
SREBF2Q12772 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SREBF2Q12772 PCDHGB8P-201ENST00000502926 1973 ntBASIC16.4■□□□□ 0.22
SREBF2Q12772 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC16.4■□□□□ 0.22
SREBF2Q12772 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SREBF2Q12772 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SREBF2Q12772 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SREBF2Q12772 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SREBF2Q12772 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SREBF2Q12772 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SREBF2Q12772 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SREBF2Q12772 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC16.4■□□□□ 0.22
SREBF2Q12772 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SREBF2Q12772 AC022080.1-201ENST00000366255 781 ntBASIC16.4■□□□□ 0.22
SREBF2Q12772 SSR4-202ENST00000370085 526 ntTSL 2 BASIC16.4■□□□□ 0.22
SREBF2Q12772 SNORA57-201ENST00000383870 149 ntBASIC16.4■□□□□ 0.22
SREBF2Q12772 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
SREBF2Q12772 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SREBF2Q12772 AC073210.1-201ENST00000414799 232 ntBASIC16.4■□□□□ 0.22
SREBF2Q12772 HNRNPA1P2-207ENST00000432375 960 ntBASIC16.4■□□□□ 0.22
SREBF2Q12772 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SREBF2Q12772 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SREBF2Q12772 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SREBF2Q12772 SLC25A15P3-201ENST00000505530 290 ntBASIC16.4■□□□□ 0.22
SREBF2Q12772 GLUD1P3-201ENST00000507952 896 ntTSL 2 BASIC16.4■□□□□ 0.22
SREBF2Q12772 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC16.4■□□□□ 0.22
SREBF2Q12772 AC078814.4-201ENST00000546650 327 ntBASIC16.4■□□□□ 0.22
SREBF2Q12772 AL136982.5-201ENST00000605222 294 ntBASIC16.4■□□□□ 0.22
SREBF2Q12772 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC16.4■□□□□ 0.22
SREBF2Q12772 GGNBP1-204ENST00000613113 887 ntBASIC16.4■□□□□ 0.22
SREBF2Q12772 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC16.4■□□□□ 0.22
SREBF2Q12772 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SREBF2Q12772 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SREBF2Q12772 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SREBF2Q12772 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
SREBF2Q12772 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SREBF2Q12772 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SREBF2Q12772 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.4■□□□□ 0.22
SREBF2Q12772 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC16.4■□□□□ 0.22
SREBF2Q12772 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SREBF2Q12772 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC16.4■□□□□ 0.22
SREBF2Q12772 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC16.4■□□□□ 0.22
SREBF2Q12772 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SREBF2Q12772 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SREBF2Q12772 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SREBF2Q12772 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SREBF2Q12772 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.22
SREBF2Q12772 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.4■□□□□ 0.22
SREBF2Q12772 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.4■□□□□ 0.22
SREBF2Q12772 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SREBF2Q12772 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SREBF2Q12772 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SREBF2Q12772 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
SREBF2Q12772 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
SREBF2Q12772 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms