Protein–RNA interactions for Protein: Q07954

LRP1, Prolow-density lipoprotein receptor-related protein 1, humanhuman

Known RBP Predictions only

Length 4,544 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1Q07954 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
LRP1Q07954 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC8.34□□□□□ -1.07
LRP1Q07954 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
LRP1Q07954 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
LRP1Q07954 CCT8L1P-201ENST00000465400 1674 ntBASIC8.34□□□□□ -1.07
LRP1Q07954 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
LRP1Q07954 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
LRP1Q07954 Z98885.3-201ENST00000624882 1757 ntBASIC8.34□□□□□ -1.07
LRP1Q07954 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
LRP1Q07954 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
LRP1Q07954 NR1I3-201ENST00000367979 1074 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
LRP1Q07954 NR1I3-207ENST00000367985 1074 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
LRP1Q07954 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
LRP1Q07954 NME2-201ENST00000393183 568 ntTSL 2 BASIC8.34□□□□□ -1.07
LRP1Q07954 HNRNPA1P21-201ENST00000424115 961 ntBASIC8.34□□□□□ -1.07
LRP1Q07954 RIC3-205ENST00000425599 867 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
LRP1Q07954 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC8.34□□□□□ -1.07
LRP1Q07954 GALP-202ENST00000440823 889 ntTSL 5 BASIC8.34□□□□□ -1.07
LRP1Q07954 IP6K2-223ENST00000453202 571 ntTSL 4 BASIC8.34□□□□□ -1.07
LRP1Q07954 PEBP1P3-201ENST00000455475 548 ntBASIC8.34□□□□□ -1.07
LRP1Q07954 AC092903.1-201ENST00000466506 262 ntBASIC8.34□□□□□ -1.07
LRP1Q07954 SMIM15-202ENST00000507416 584 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
LRP1Q07954 NR1I3-225ENST00000508387 634 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
LRP1Q07954 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC8.34□□□□□ -1.07
LRP1Q07954 EMP3-204ENST00000596315 761 ntTSL 2 BASIC8.34□□□□□ -1.07
LRP1Q07954 AC104506.1-201ENST00000609247 429 ntBASIC8.34□□□□□ -1.07
LRP1Q07954 AC011498.7-201ENST00000624986 2027 ntBASIC8.34□□□□□ -1.07
LRP1Q07954 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
LRP1Q07954 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
LRP1Q07954 GUCY2EP-203ENST00000531117 1918 ntBASIC8.34□□□□□ -1.07
LRP1Q07954 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
LRP1Q07954 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
LRP1Q07954 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC8.34□□□□□ -1.07
LRP1Q07954 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
LRP1Q07954 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
LRP1Q07954 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
LRP1Q07954 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC8.34□□□□□ -1.07
LRP1Q07954 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
LRP1Q07954 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC8.34□□□□□ -1.07
LRP1Q07954 CELA3A-202ENST00000374663 649 ntTSL 2 BASIC8.34□□□□□ -1.07
LRP1Q07954 AC004893.2-203ENST00000482799 796 ntTSL 3 BASIC8.34□□□□□ -1.07
LRP1Q07954 AC093510.1-202ENST00000546238 442 ntTSL 3 BASIC8.34□□□□□ -1.07
LRP1Q07954 C12orf73-204ENST00000546819 582 ntTSL 4 BASIC8.34□□□□□ -1.07
LRP1Q07954 AL157871.1-201ENST00000555428 429 ntTSL 3 BASIC8.34□□□□□ -1.07
LRP1Q07954 AC007223.1-201ENST00000564076 572 ntTSL 3 BASIC8.34□□□□□ -1.07
LRP1Q07954 AC087072.1-201ENST00000603727 421 ntBASIC8.34□□□□□ -1.07
LRP1Q07954 RFPL3-201ENST00000249007 1488 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
LRP1Q07954 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC8.34□□□□□ -1.07
LRP1Q07954 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
LRP1Q07954 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
LRP1Q07954 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC8.34□□□□□ -1.07
LRP1Q07954 USP39-220ENST00000613444 2161 ntTSL 2 BASIC8.34□□□□□ -1.07
LRP1Q07954 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC8.34□□□□□ -1.07
LRP1Q07954 AC015909.5-201ENST00000624336 2266 ntBASIC8.34□□□□□ -1.07
LRP1Q07954 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
LRP1Q07954 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
LRP1Q07954 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.08
LRP1Q07954 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.08
LRP1Q07954 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC8.33□□□□□ -1.08
LRP1Q07954 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
LRP1Q07954 IL18BP-201ENST00000260049 1354 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
LRP1Q07954 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
LRP1Q07954 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC8.33□□□□□ -1.08
LRP1Q07954 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC8.33□□□□□ -1.08
LRP1Q07954 POLR2LP1-206ENST00000444785 187 ntBASIC8.33□□□□□ -1.08
LRP1Q07954 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
LRP1Q07954 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
LRP1Q07954 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
LRP1Q07954 TCL1A-209ENST00000557043 980 ntTSL 3 BASIC8.33□□□□□ -1.08
LRP1Q07954 IRF3-213ENST00000596765 710 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
LRP1Q07954 ZNF677-210ENST00000601413 706 ntTSL 2 BASIC8.33□□□□□ -1.08
LRP1Q07954 STX3-207ENST00000633708 3111 ntTSL 5 BASIC8.33□□□□□ -1.08
LRP1Q07954 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
LRP1Q07954 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
LRP1Q07954 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC8.33□□□□□ -1.08
LRP1Q07954 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC8.33□□□□□ -1.08
LRP1Q07954 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
LRP1Q07954 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
LRP1Q07954 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC8.33□□□□□ -1.08
LRP1Q07954 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC8.33□□□□□ -1.08
LRP1Q07954 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
LRP1Q07954 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC8.33□□□□□ -1.08
LRP1Q07954 MIF4GD-201ENST00000245551 1358 ntTSL 3 BASIC8.33□□□□□ -1.08
LRP1Q07954 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC8.33□□□□□ -1.08
LRP1Q07954 COCH-203ENST00000460581 2688 ntTSL 2 BASIC8.33□□□□□ -1.08
LRP1Q07954 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
LRP1Q07954 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
LRP1Q07954 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
LRP1Q07954 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
LRP1Q07954 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
LRP1Q07954 SPTLC1P3-201ENST00000403408 259 ntBASIC8.33□□□□□ -1.08
LRP1Q07954 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC8.33□□□□□ -1.08
LRP1Q07954 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC8.33□□□□□ -1.08
LRP1Q07954 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC8.33□□□□□ -1.08
LRP1Q07954 AC092720.1-202ENST00000565824 555 ntTSL 4 BASIC8.33□□□□□ -1.08
LRP1Q07954 SRRM2-AS1-204ENST00000573802 818 ntTSL 2 BASIC8.33□□□□□ -1.08
LRP1Q07954 NAT9-219ENST00000582524 573 ntTSL 4 BASIC8.33□□□□□ -1.08
LRP1Q07954 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC8.33□□□□□ -1.08
LRP1Q07954 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC8.33□□□□□ -1.08
LRP1Q07954 ESR1-214ENST00000638569 132 ntTSL 5 BASIC8.33□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms