Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL16A1Q07092 TP73-207ENST00000378290 1831 ntTSL 2 BASIC18.85■□□□□ 0.61
COL16A1Q07092 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL16A1Q07092 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL16A1Q07092 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL16A1Q07092 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
COL16A1Q07092 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
COL16A1Q07092 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL16A1Q07092 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
COL16A1Q07092 SULT1A3-201ENST00000338971 1097 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL16A1Q07092 DPPA5-201ENST00000370370 679 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COL16A1Q07092 AL133351.2-201ENST00000437718 484 ntTSL 2 BASIC18.85■□□□□ 0.61
COL16A1Q07092 HNRNPA1P73-201ENST00000446472 928 ntBASIC18.85■□□□□ 0.61
COL16A1Q07092 TPT1P11-201ENST00000458482 498 ntBASIC18.85■□□□□ 0.61
COL16A1Q07092 AC008021.1-201ENST00000474180 414 ntBASIC18.85■□□□□ 0.61
COL16A1Q07092 PDCD2-205ENST00000537445 1114 ntTSL 3 BASIC18.85■□□□□ 0.61
COL16A1Q07092 SLC25A3-206ENST00000547534 556 ntTSL 2 BASIC18.85■□□□□ 0.61
COL16A1Q07092 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC18.85■□□□□ 0.61
COL16A1Q07092 AL353581.1-201ENST00000606916 1224 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
COL16A1Q07092 SDHD-214ENST00000614349 516 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
COL16A1Q07092 MIR6165-201ENST00000614803 84 ntBASIC18.85■□□□□ 0.61
COL16A1Q07092 AC114296.1-202ENST00000638019 771 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
COL16A1Q07092 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC18.85■□□□□ 0.61
COL16A1Q07092 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
COL16A1Q07092 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
COL16A1Q07092 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
COL16A1Q07092 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL16A1Q07092 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
COL16A1Q07092 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
COL16A1Q07092 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL16A1Q07092 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC18.84■□□□□ 0.61
COL16A1Q07092 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL16A1Q07092 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
COL16A1Q07092 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL16A1Q07092 AC232323.1-201ENST00000540724 2099 ntBASIC18.84■□□□□ 0.61
COL16A1Q07092 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
COL16A1Q07092 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL16A1Q07092 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC18.84■□□□□ 0.61
COL16A1Q07092 COA6-201ENST00000366612 1013 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL16A1Q07092 AC245128.1-201ENST00000400864 1294 ntTSL 5 BASIC18.84■□□□□ 0.61
COL16A1Q07092 AC007383.2-201ENST00000420509 752 ntTSL 2 BASIC18.84■□□□□ 0.61
COL16A1Q07092 Z69733.1-201ENST00000445990 632 ntTSL 3 BASIC18.84■□□□□ 0.61
COL16A1Q07092 PRSS46-201ENST00000463091 982 ntAPPRIS P1 TSL 4 BASIC18.84■□□□□ 0.61
COL16A1Q07092 TRBV11-2-201ENST00000471935 408 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
COL16A1Q07092 AP001107.9-202ENST00000531602 613 ntTSL 2 BASIC18.84■□□□□ 0.61
COL16A1Q07092 AC010319.2-201ENST00000594663 892 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
COL16A1Q07092 LUC7L3-223ENST00000625349 408 ntTSL 2 BASIC18.84■□□□□ 0.61
COL16A1Q07092 CDIPT-AS1-203ENST00000638164 713 ntBASIC18.84■□□□□ 0.61
COL16A1Q07092 AC011270.2-201ENST00000624293 2550 ntBASIC18.84■□□□□ 0.61
COL16A1Q07092 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL16A1Q07092 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COL16A1Q07092 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
COL16A1Q07092 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
COL16A1Q07092 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
COL16A1Q07092 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
COL16A1Q07092 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
COL16A1Q07092 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC18.83■□□□□ 0.61
COL16A1Q07092 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
COL16A1Q07092 PRDX2-202ENST00000334482 784 ntTSL 3 BASIC18.83■□□□□ 0.61
COL16A1Q07092 CRCT1-201ENST00000368790 700 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
COL16A1Q07092 AL121994.1-201ENST00000413189 402 ntBASIC18.83■□□□□ 0.61
COL16A1Q07092 AP002856.3-201ENST00000441665 635 ntTSL 3 BASIC18.83■□□□□ 0.61
COL16A1Q07092 HAND2-AS1-208ENST00000504740 837 ntTSL 3 BASIC18.83■□□□□ 0.61
COL16A1Q07092 COX14-204ENST00000550654 580 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
COL16A1Q07092 MSRB1-205ENST00000564908 550 ntTSL 3 BASIC18.83■□□□□ 0.61
COL16A1Q07092 AC142381.4-201ENST00000566806 702 ntTSL 3 BASIC18.83■□□□□ 0.61
COL16A1Q07092 AC142086.5-201ENST00000567619 702 ntTSL 5 BASIC18.83■□□□□ 0.61
COL16A1Q07092 AC138150.1-201ENST00000589950 570 ntTSL 4 BASIC18.83■□□□□ 0.61
COL16A1Q07092 AL078624.1-201ENST00000604004 547 ntBASIC18.83■□□□□ 0.61
COL16A1Q07092 AC008622.3-201ENST00000621170 600 ntBASIC18.83■□□□□ 0.61
COL16A1Q07092 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
COL16A1Q07092 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COL16A1Q07092 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
COL16A1Q07092 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC18.83■□□□□ 0.6
COL16A1Q07092 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
COL16A1Q07092 POLL-206ENST00000370172 2308 ntTSL 2 BASIC18.83■□□□□ 0.6
COL16A1Q07092 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
COL16A1Q07092 STK16-202ENST00000409260 1493 ntTSL 5 BASIC18.83■□□□□ 0.6
COL16A1Q07092 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COL16A1Q07092 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COL16A1Q07092 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC18.83■□□□□ 0.6
COL16A1Q07092 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC18.83■□□□□ 0.6
COL16A1Q07092 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
COL16A1Q07092 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL16A1Q07092 BCKDHA-202ENST00000457836 1745 ntTSL 2 BASIC18.82■□□□□ 0.6
COL16A1Q07092 AC022532.1-201ENST00000624563 1728 ntBASIC18.82■□□□□ 0.6
COL16A1Q07092 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL16A1Q07092 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL16A1Q07092 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL16A1Q07092 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC18.82■□□□□ 0.6
COL16A1Q07092 FAM25A-201ENST00000343959 345 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL16A1Q07092 PSMA7-202ENST00000370861 773 ntTSL 5 BASIC18.82■□□□□ 0.6
COL16A1Q07092 AC092865.2-201ENST00000439409 971 ntBASIC18.82■□□□□ 0.6
COL16A1Q07092 AC005042.2-201ENST00000449526 510 ntTSL 4 BASIC18.82■□□□□ 0.6
COL16A1Q07092 AP002495.1-205ENST00000529513 655 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
COL16A1Q07092 SCGB1A1-202ENST00000534397 466 ntTSL 3 BASIC18.82■□□□□ 0.6
COL16A1Q07092 AC078923.1-201ENST00000552856 748 ntTSL 3 BASIC18.82■□□□□ 0.6
COL16A1Q07092 AC091691.1-201ENST00000583587 1018 ntBASIC18.82■□□□□ 0.6
COL16A1Q07092 PDZRN3-AS1-203ENST00000608743 780 ntTSL 5 BASIC18.82■□□□□ 0.6
COL16A1Q07092 AC008993.3-201ENST00000633603 631 ntTSL 5 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms