Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDKL1Q00532 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDKL1Q00532 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDKL1Q00532 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CDKL1Q00532 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDKL1Q00532 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDKL1Q00532 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CDKL1Q00532 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CDKL1Q00532 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC14.45□□□□□ -0.1
CDKL1Q00532 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
CDKL1Q00532 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
CDKL1Q00532 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDKL1Q00532 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDKL1Q00532 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDKL1Q00532 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDKL1Q00532 AL122018.1-201ENST00000446607 2310 ntBASIC14.44□□□□□ -0.1
CDKL1Q00532 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CDKL1Q00532 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDKL1Q00532 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDKL1Q00532 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDKL1Q00532 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CDKL1Q00532 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC14.44□□□□□ -0.1
CDKL1Q00532 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDKL1Q00532 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC14.44□□□□□ -0.1
CDKL1Q00532 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDKL1Q00532 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC14.44□□□□□ -0.1
CDKL1Q00532 OR2I1P-209ENST00000641730 5365 ntBASIC14.44□□□□□ -0.1
CDKL1Q00532 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CDKL1Q00532 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
CDKL1Q00532 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDKL1Q00532 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CDKL1Q00532 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDKL1Q00532 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDKL1Q00532 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDKL1Q00532 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CDKL1Q00532 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CDKL1Q00532 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CDKL1Q00532 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC14.44□□□□□ -0.1
CDKL1Q00532 PUDPP3-201ENST00000445368 636 ntBASIC14.44□□□□□ -0.1
CDKL1Q00532 BCRP2-202ENST00000447763 634 ntBASIC14.44□□□□□ -0.1
CDKL1Q00532 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC14.44□□□□□ -0.1
CDKL1Q00532 BCRP6-201ENST00000510112 632 ntBASIC14.44□□□□□ -0.1
CDKL1Q00532 BCRP7-201ENST00000511549 544 ntBASIC14.44□□□□□ -0.1
CDKL1Q00532 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC14.44□□□□□ -0.1
CDKL1Q00532 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CDKL1Q00532 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CDKL1Q00532 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC14.44□□□□□ -0.1
CDKL1Q00532 AC132938.2-201ENST00000579188 680 ntBASIC14.44□□□□□ -0.1
CDKL1Q00532 ECM1P1-201ENST00000604092 1279 ntBASIC14.44□□□□□ -0.1
CDKL1Q00532 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC14.44□□□□□ -0.1
CDKL1Q00532 LARP4-220ENST00000615080 856 ntTSL 5 BASIC14.44□□□□□ -0.1
CDKL1Q00532 AL591163.1-201ENST00000641757 987 ntBASIC14.44□□□□□ -0.1
CDKL1Q00532 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CDKL1Q00532 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDKL1Q00532 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CDKL1Q00532 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CDKL1Q00532 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CDKL1Q00532 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDKL1Q00532 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.44□□□□□ -0.1
CDKL1Q00532 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDKL1Q00532 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CDKL1Q00532 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CDKL1Q00532 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CDKL1Q00532 AC015688.4-201ENST00000580780 1647 ntBASIC14.44□□□□□ -0.1
CDKL1Q00532 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDKL1Q00532 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDKL1Q00532 SLC6A6P1-201ENST00000413933 1850 ntBASIC14.44□□□□□ -0.1
CDKL1Q00532 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDKL1Q00532 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
CDKL1Q00532 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDKL1Q00532 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.43□□□□□ -0.1
CDKL1Q00532 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CDKL1Q00532 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDKL1Q00532 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDKL1Q00532 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CDKL1Q00532 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC14.43□□□□□ -0.1
CDKL1Q00532 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CDKL1Q00532 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC14.43□□□□□ -0.1
CDKL1Q00532 KHSRPP1-201ENST00000427983 1768 ntBASIC14.43□□□□□ -0.1
CDKL1Q00532 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDKL1Q00532 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDKL1Q00532 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDKL1Q00532 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDKL1Q00532 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDKL1Q00532 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDKL1Q00532 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDKL1Q00532 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CDKL1Q00532 CALY-203ENST00000368558 825 ntTSL 5 BASIC14.43□□□□□ -0.1
CDKL1Q00532 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CDKL1Q00532 AC004945.1-201ENST00000416738 983 ntBASIC14.43□□□□□ -0.1
CDKL1Q00532 NME2P1-201ENST00000426182 414 ntBASIC14.43□□□□□ -0.1
CDKL1Q00532 FAM8A4P-201ENST00000435433 1213 ntBASIC14.43□□□□□ -0.1
CDKL1Q00532 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC14.43□□□□□ -0.1
CDKL1Q00532 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC14.43□□□□□ -0.1
CDKL1Q00532 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
CDKL1Q00532 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDKL1Q00532 LHX6-205ENST00000464484 666 ntTSL 2 BASIC14.43□□□□□ -0.1
CDKL1Q00532 TAF8-206ENST00000472818 719 ntTSL 2 BASIC14.43□□□□□ -0.1
CDKL1Q00532 FTH1P14-201ENST00000482930 551 ntBASIC14.43□□□□□ -0.1
CDKL1Q00532 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms