Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CDK3Q00526 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14.32□□□□□ -0.12
CDK3Q00526 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC14.32□□□□□ -0.12
CDK3Q00526 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDK3Q00526 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDK3Q00526 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CDK3Q00526 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CDK3Q00526 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDK3Q00526 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CDK3Q00526 AP001267.2-201ENST00000532619 2086 ntBASIC14.32□□□□□ -0.12
CDK3Q00526 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CDK3Q00526 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CDK3Q00526 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
CDK3Q00526 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.32□□□□□ -0.12
CDK3Q00526 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDK3Q00526 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDK3Q00526 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDK3Q00526 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.32□□□□□ -0.12
CDK3Q00526 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDK3Q00526 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CDK3Q00526 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.32□□□□□ -0.12
CDK3Q00526 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CDK3Q00526 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDK3Q00526 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC14.32□□□□□ -0.12
CDK3Q00526 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDK3Q00526 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CDK3Q00526 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDK3Q00526 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CDK3Q00526 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC14.32□□□□□ -0.12
CDK3Q00526 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC14.32□□□□□ -0.12
CDK3Q00526 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CDK3Q00526 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDK3Q00526 PDIA3P2-201ENST00000428073 158 ntBASIC14.32□□□□□ -0.12
CDK3Q00526 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC14.32□□□□□ -0.12
CDK3Q00526 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC14.32□□□□□ -0.12
CDK3Q00526 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC14.32□□□□□ -0.12
CDK3Q00526 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC14.32□□□□□ -0.12
CDK3Q00526 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CDK3Q00526 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC14.32□□□□□ -0.12
CDK3Q00526 MIR3188-201ENST00000583494 85 ntBASIC14.32□□□□□ -0.12
CDK3Q00526 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
CDK3Q00526 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC14.32□□□□□ -0.12
CDK3Q00526 AC021016.3-201ENST00000608367 477 ntBASIC14.32□□□□□ -0.12
CDK3Q00526 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC14.32□□□□□ -0.12
CDK3Q00526 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC14.32□□□□□ -0.12
CDK3Q00526 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC14.32□□□□□ -0.12
CDK3Q00526 AC068587.10-201ENST00000641210 219 ntBASIC14.32□□□□□ -0.12
CDK3Q00526 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CDK3Q00526 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CDK3Q00526 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CDK3Q00526 AL365209.1-201ENST00000624418 6473 ntBASIC14.32□□□□□ -0.12
CDK3Q00526 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC14.32□□□□□ -0.12
CDK3Q00526 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDK3Q00526 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.32□□□□□ -0.12
CDK3Q00526 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDK3Q00526 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDK3Q00526 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDK3Q00526 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.32□□□□□ -0.12
CDK3Q00526 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDK3Q00526 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
CDK3Q00526 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
CDK3Q00526 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CDK3Q00526 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CDK3Q00526 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC14.32□□□□□ -0.12
CDK3Q00526 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC14.32□□□□□ -0.12
CDK3Q00526 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
CDK3Q00526 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDK3Q00526 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.31□□□□□ -0.12
CDK3Q00526 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDK3Q00526 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDK3Q00526 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDK3Q00526 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
CDK3Q00526 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDK3Q00526 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.31□□□□□ -0.12
CDK3Q00526 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CDK3Q00526 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
CDK3Q00526 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC14.31□□□□□ -0.12
CDK3Q00526 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDK3Q00526 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
CDK3Q00526 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.31□□□□□ -0.12
CDK3Q00526 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDK3Q00526 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDK3Q00526 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDK3Q00526 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDK3Q00526 LBH-202ENST00000401506 485 ntTSL 3 BASIC14.31□□□□□ -0.12
CDK3Q00526 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC14.31□□□□□ -0.12
CDK3Q00526 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC14.31□□□□□ -0.12
CDK3Q00526 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC14.31□□□□□ -0.12
CDK3Q00526 AC073150.1-201ENST00000450406 1084 ntBASIC14.31□□□□□ -0.12
CDK3Q00526 UPF3AP2-201ENST00000457924 1132 ntBASIC14.31□□□□□ -0.12
CDK3Q00526 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC14.31□□□□□ -0.12
CDK3Q00526 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC14.31□□□□□ -0.12
CDK3Q00526 POU5F1P2-201ENST00000521750 823 ntBASIC14.31□□□□□ -0.12
CDK3Q00526 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC14.31□□□□□ -0.12
CDK3Q00526 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CDK3Q00526 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC14.31□□□□□ -0.12
CDK3Q00526 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC14.31□□□□□ -0.12
CDK3Q00526 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.31□□□□□ -0.12
CDK3Q00526 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC14.31□□□□□ -0.12
CDK3Q00526 AL591471.1-201ENST00000621855 229 ntBASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms