Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ASIC1P78348 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ASIC1P78348 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
ASIC1P78348 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ASIC1P78348 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
ASIC1P78348 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC16.35■□□□□ 0.21
ASIC1P78348 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
ASIC1P78348 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC16.35■□□□□ 0.21
ASIC1P78348 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC16.35■□□□□ 0.21
ASIC1P78348 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ASIC1P78348 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ASIC1P78348 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC16.35■□□□□ 0.21
ASIC1P78348 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ASIC1P78348 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC16.35■□□□□ 0.21
ASIC1P78348 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ASIC1P78348 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ASIC1P78348 AC041040.2-201ENST00000622926 2899 ntBASIC16.35■□□□□ 0.21
ASIC1P78348 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC16.35■□□□□ 0.21
ASIC1P78348 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC16.35■□□□□ 0.21
ASIC1P78348 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ASIC1P78348 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
ASIC1P78348 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ASIC1P78348 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ASIC1P78348 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC16.35■□□□□ 0.21
ASIC1P78348 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC16.35■□□□□ 0.21
ASIC1P78348 AC234783.1-201ENST00000441761 496 ntBASIC16.35■□□□□ 0.21
ASIC1P78348 GAPDHP21-201ENST00000450301 1010 ntBASIC16.35■□□□□ 0.21
ASIC1P78348 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ASIC1P78348 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC16.35■□□□□ 0.21
ASIC1P78348 CICP12-201ENST00000455801 843 ntBASIC16.35■□□□□ 0.21
ASIC1P78348 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ASIC1P78348 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC16.35■□□□□ 0.21
ASIC1P78348 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC16.35■□□□□ 0.21
ASIC1P78348 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC16.35■□□□□ 0.21
ASIC1P78348 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC16.35■□□□□ 0.21
ASIC1P78348 KRT17P8-201ENST00000540749 863 ntBASIC16.35■□□□□ 0.21
ASIC1P78348 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ASIC1P78348 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC16.35■□□□□ 0.21
ASIC1P78348 C2orf69P2-201ENST00000562032 1123 ntBASIC16.35■□□□□ 0.21
ASIC1P78348 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC16.35■□□□□ 0.21
ASIC1P78348 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC16.35■□□□□ 0.21
ASIC1P78348 AL136301.1-201ENST00000615830 422 ntBASIC16.35■□□□□ 0.21
ASIC1P78348 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC16.35■□□□□ 0.21
ASIC1P78348 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
ASIC1P78348 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
ASIC1P78348 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
ASIC1P78348 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC16.35■□□□□ 0.21
ASIC1P78348 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC16.35■□□□□ 0.21
ASIC1P78348 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
ASIC1P78348 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC16.35■□□□□ 0.21
ASIC1P78348 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC16.35■□□□□ 0.21
ASIC1P78348 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ASIC1P78348 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC16.35■□□□□ 0.21
ASIC1P78348 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ASIC1P78348 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ASIC1P78348 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ASIC1P78348 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC16.35■□□□□ 0.21
ASIC1P78348 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ASIC1P78348 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
ASIC1P78348 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
ASIC1P78348 HSPA8P5-201ENST00000456928 2069 ntBASIC16.34■□□□□ 0.21
ASIC1P78348 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ASIC1P78348 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC16.34■□□□□ 0.21
ASIC1P78348 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC16.34■□□□□ 0.21
ASIC1P78348 R3HDM2P2-201ENST00000401880 2116 ntBASIC16.34■□□□□ 0.21
ASIC1P78348 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
ASIC1P78348 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ASIC1P78348 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ASIC1P78348 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC16.34■□□□□ 0.21
ASIC1P78348 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
ASIC1P78348 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ASIC1P78348 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ASIC1P78348 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ASIC1P78348 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
ASIC1P78348 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
ASIC1P78348 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ASIC1P78348 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
ASIC1P78348 GZMB-202ENST00000382540 816 ntTSL 5 BASIC16.34■□□□□ 0.21
ASIC1P78348 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC16.34■□□□□ 0.21
ASIC1P78348 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
ASIC1P78348 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC16.34■□□□□ 0.21
ASIC1P78348 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
ASIC1P78348 AC112492.5-201ENST00000421897 457 ntBASIC16.34■□□□□ 0.21
ASIC1P78348 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC16.34■□□□□ 0.21
ASIC1P78348 AL355994.2-201ENST00000447882 704 ntBASIC16.34■□□□□ 0.21
ASIC1P78348 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ASIC1P78348 KLF2P4-201ENST00000451959 1225 ntBASIC16.34■□□□□ 0.21
ASIC1P78348 CTBP2P5-201ENST00000454986 1264 ntBASIC16.34■□□□□ 0.21
ASIC1P78348 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC16.34■□□□□ 0.21
ASIC1P78348 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
ASIC1P78348 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC16.34■□□□□ 0.21
ASIC1P78348 RBM7-207ENST00000544582 692 ntTSL 3 BASIC16.34■□□□□ 0.21
ASIC1P78348 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ASIC1P78348 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC16.34■□□□□ 0.21
ASIC1P78348 WNT11-204ENST00000621122 789 ntTSL 5 BASIC16.34■□□□□ 0.21
ASIC1P78348 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC16.34■□□□□ 0.21
ASIC1P78348 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC16.34■□□□□ 0.21
ASIC1P78348 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ASIC1P78348 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
ASIC1P78348 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms