Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SPCS3P61009 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
SPCS3P61009 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC12.01□□□□□ -0.49
SPCS3P61009 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SPCS3P61009 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SPCS3P61009 CA14-201ENST00000369111 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SPCS3P61009 ATL2-204ENST00000406122 2864 ntTSL 5 BASIC12.01□□□□□ -0.49
SPCS3P61009 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
SPCS3P61009 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
SPCS3P61009 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SPCS3P61009 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
SPCS3P61009 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SPCS3P61009 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SPCS3P61009 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
SPCS3P61009 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
SPCS3P61009 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
SPCS3P61009 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
SPCS3P61009 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SPCS3P61009 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC12.01□□□□□ -0.49
SPCS3P61009 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC12.01□□□□□ -0.49
SPCS3P61009 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SPCS3P61009 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
SPCS3P61009 TSEN15P1-201ENST00000423257 515 ntBASIC12.01□□□□□ -0.49
SPCS3P61009 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC12.01□□□□□ -0.49
SPCS3P61009 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC12.01□□□□□ -0.49
SPCS3P61009 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SPCS3P61009 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC12.01□□□□□ -0.49
SPCS3P61009 DUX4L47-201ENST00000566374 394 ntBASIC12.01□□□□□ -0.49
SPCS3P61009 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC12.01□□□□□ -0.49
SPCS3P61009 AC015911.4-201ENST00000588022 1070 ntBASIC12.01□□□□□ -0.49
SPCS3P61009 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC12.01□□□□□ -0.49
SPCS3P61009 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC12.01□□□□□ -0.49
SPCS3P61009 AL158211.3-201ENST00000607385 239 ntBASIC12.01□□□□□ -0.49
SPCS3P61009 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC12.01□□□□□ -0.49
SPCS3P61009 BX539320.1-201ENST00000623759 877 ntBASIC12.01□□□□□ -0.49
SPCS3P61009 AL603764.1-201ENST00000636452 321 ntBASIC12.01□□□□□ -0.49
SPCS3P61009 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SPCS3P61009 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC12.01□□□□□ -0.49
SPCS3P61009 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
SPCS3P61009 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SPCS3P61009 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SPCS3P61009 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SPCS3P61009 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SPCS3P61009 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SPCS3P61009 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC12.01□□□□□ -0.49
SPCS3P61009 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
SPCS3P61009 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
SPCS3P61009 AC100757.3-201ENST00000622361 1406 ntBASIC12.01□□□□□ -0.49
SPCS3P61009 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SPCS3P61009 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
SPCS3P61009 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SPCS3P61009 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
SPCS3P61009 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC12.01□□□□□ -0.49
SPCS3P61009 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
SPCS3P61009 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SPCS3P61009 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC12.01□□□□□ -0.49
SPCS3P61009 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
SPCS3P61009 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC12.01□□□□□ -0.49
SPCS3P61009 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SPCS3P61009 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC12□□□□□ -0.49
SPCS3P61009 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SPCS3P61009 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SPCS3P61009 SON-203ENST00000381679 7860 ntTSL 5 BASIC12□□□□□ -0.49
SPCS3P61009 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC12□□□□□ -0.49
SPCS3P61009 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC12□□□□□ -0.49
SPCS3P61009 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC12□□□□□ -0.49
SPCS3P61009 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
SPCS3P61009 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC12□□□□□ -0.49
SPCS3P61009 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC12□□□□□ -0.49
SPCS3P61009 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
SPCS3P61009 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
SPCS3P61009 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SPCS3P61009 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SPCS3P61009 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
SPCS3P61009 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
SPCS3P61009 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
SPCS3P61009 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
SPCS3P61009 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
SPCS3P61009 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SPCS3P61009 STRCP1-201ENST00000509801 5328 ntBASIC12□□□□□ -0.49
SPCS3P61009 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
SPCS3P61009 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SPCS3P61009 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC12□□□□□ -0.49
SPCS3P61009 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
SPCS3P61009 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
SPCS3P61009 AL139094.1-201ENST00000405549 1188 ntBASIC12□□□□□ -0.49
SPCS3P61009 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC12□□□□□ -0.49
SPCS3P61009 TLE1P1-201ENST00000422965 589 ntBASIC12□□□□□ -0.49
SPCS3P61009 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC12□□□□□ -0.49
SPCS3P61009 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC12□□□□□ -0.49
SPCS3P61009 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
SPCS3P61009 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC12□□□□□ -0.49
SPCS3P61009 MYADML-201ENST00000474610 2147 ntBASIC12□□□□□ -0.49
SPCS3P61009 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
SPCS3P61009 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC12□□□□□ -0.49
SPCS3P61009 AL049840.4-201ENST00000602422 811 ntBASIC12□□□□□ -0.49
SPCS3P61009 MIR6074-201ENST00000612054 107 ntBASIC12□□□□□ -0.49
SPCS3P61009 AL590560.3-201ENST00000623350 461 ntBASIC12□□□□□ -0.49
SPCS3P61009 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC12□□□□□ -0.49
SPCS3P61009 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms