Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 LBH-202ENST00000401506 485 ntTSL 3 BASIC13.05□□□□□ -0.32
GFRA1P56159 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
GFRA1P56159 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC13.05□□□□□ -0.32
GFRA1P56159 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC13.05□□□□□ -0.32
GFRA1P56159 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC13.05□□□□□ -0.32
GFRA1P56159 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
GFRA1P56159 AC012618.1-201ENST00000461223 412 ntBASIC13.05□□□□□ -0.32
GFRA1P56159 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC13.05□□□□□ -0.32
GFRA1P56159 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC13.05□□□□□ -0.32
GFRA1P56159 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC13.05□□□□□ -0.32
GFRA1P56159 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC13.05□□□□□ -0.32
GFRA1P56159 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC13.05□□□□□ -0.32
GFRA1P56159 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC13.05□□□□□ -0.32
GFRA1P56159 AC104506.1-201ENST00000609247 429 ntBASIC13.05□□□□□ -0.32
GFRA1P56159 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC13.05□□□□□ -0.32
GFRA1P56159 NID2-208ENST00000617139 3827 ntTSL 5 BASIC13.05□□□□□ -0.32
GFRA1P56159 AC090386.2-201ENST00000623010 1039 ntBASIC13.05□□□□□ -0.32
GFRA1P56159 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC13.05□□□□□ -0.32
GFRA1P56159 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
GFRA1P56159 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.05□□□□□ -0.32
GFRA1P56159 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
GFRA1P56159 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
GFRA1P56159 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC13.05□□□□□ -0.32
GFRA1P56159 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC13.05□□□□□ -0.32
GFRA1P56159 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
GFRA1P56159 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
GFRA1P56159 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
GFRA1P56159 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
GFRA1P56159 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
GFRA1P56159 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC13.05□□□□□ -0.32
GFRA1P56159 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
GFRA1P56159 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
GFRA1P56159 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
GFRA1P56159 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
GFRA1P56159 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.05□□□□□ -0.32
GFRA1P56159 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC13.05□□□□□ -0.32
GFRA1P56159 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
GFRA1P56159 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
GFRA1P56159 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.04□□□□□ -0.32
GFRA1P56159 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
GFRA1P56159 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
GFRA1P56159 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC13.04□□□□□ -0.32
GFRA1P56159 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
GFRA1P56159 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
GFRA1P56159 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.04□□□□□ -0.32
GFRA1P56159 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.04□□□□□ -0.32
GFRA1P56159 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
GFRA1P56159 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
GFRA1P56159 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
GFRA1P56159 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
GFRA1P56159 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC13.04□□□□□ -0.32
GFRA1P56159 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
GFRA1P56159 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
GFRA1P56159 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
GFRA1P56159 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
GFRA1P56159 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
GFRA1P56159 LINC01165-201ENST00000445190 1623 ntBASIC13.04□□□□□ -0.32
GFRA1P56159 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
GFRA1P56159 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
GFRA1P56159 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.04□□□□□ -0.32
GFRA1P56159 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
GFRA1P56159 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC13.04□□□□□ -0.32
GFRA1P56159 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
GFRA1P56159 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
GFRA1P56159 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
GFRA1P56159 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
GFRA1P56159 TSPY25P-201ENST00000429463 745 ntBASIC13.04□□□□□ -0.32
GFRA1P56159 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC13.04□□□□□ -0.32
GFRA1P56159 AL133466.1-201ENST00000447582 150 ntBASIC13.04□□□□□ -0.32
GFRA1P56159 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC13.04□□□□□ -0.32
GFRA1P56159 RN7SL574P-201ENST00000581512 297 ntBASIC13.04□□□□□ -0.32
GFRA1P56159 AC021016.3-201ENST00000608367 477 ntBASIC13.04□□□□□ -0.32
GFRA1P56159 AC097724.1-201ENST00000609581 426 ntBASIC13.04□□□□□ -0.32
GFRA1P56159 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC13.04□□□□□ -0.32
GFRA1P56159 AL591471.1-201ENST00000621855 229 ntBASIC13.04□□□□□ -0.32
GFRA1P56159 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
GFRA1P56159 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
GFRA1P56159 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
GFRA1P56159 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
GFRA1P56159 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
GFRA1P56159 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
GFRA1P56159 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
GFRA1P56159 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
GFRA1P56159 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
GFRA1P56159 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.04□□□□□ -0.32
GFRA1P56159 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.04□□□□□ -0.32
GFRA1P56159 AC090505.1-201ENST00000430515 1834 ntBASIC13.04□□□□□ -0.32
GFRA1P56159 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC13.04□□□□□ -0.32
GFRA1P56159 AC015802.1-201ENST00000588104 1449 ntBASIC13.04□□□□□ -0.32
GFRA1P56159 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
GFRA1P56159 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
GFRA1P56159 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.04□□□□□ -0.32
GFRA1P56159 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
GFRA1P56159 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
GFRA1P56159 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC13.03□□□□□ -0.32
GFRA1P56159 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
GFRA1P56159 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
GFRA1P56159 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
GFRA1P56159 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC13.03□□□□□ -0.32
GFRA1P56159 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms