Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 FES-203ENST00000394302 2133 ntTSL 5 BASIC15.71■□□□□ 0.11
VCPP55072 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
VCPP55072 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
VCPP55072 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
VCPP55072 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
VCPP55072 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VCPP55072 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VCPP55072 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VCPP55072 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VCPP55072 MIR1227-201ENST00000408484 88 ntBASIC15.71■□□□□ 0.11
VCPP55072 CMC1-204ENST00000423894 549 ntTSL 2 BASIC15.71■□□□□ 0.11
VCPP55072 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC15.71■□□□□ 0.11
VCPP55072 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
VCPP55072 AC011742.3-201ENST00000439053 820 ntBASIC15.71■□□□□ 0.11
VCPP55072 OARD1-204ENST00000464633 717 ntTSL 2 BASIC15.71■□□□□ 0.11
VCPP55072 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC15.71■□□□□ 0.11
VCPP55072 AC005740.2-201ENST00000511085 419 ntBASIC15.71■□□□□ 0.11
VCPP55072 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC15.71■□□□□ 0.11
VCPP55072 AL161670.2-201ENST00000557650 1227 ntBASIC15.71■□□□□ 0.11
VCPP55072 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC15.71■□□□□ 0.11
VCPP55072 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
VCPP55072 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VCPP55072 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
VCPP55072 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC15.71■□□□□ 0.11
VCPP55072 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
VCPP55072 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
VCPP55072 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
VCPP55072 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.1
VCPP55072 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
VCPP55072 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
VCPP55072 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
VCPP55072 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.1
VCPP55072 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC15.71■□□□□ 0.1
VCPP55072 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VCPP55072 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VCPP55072 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
VCPP55072 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VCPP55072 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VCPP55072 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC15.7■□□□□ 0.1
VCPP55072 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VCPP55072 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VCPP55072 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC15.7■□□□□ 0.1
VCPP55072 AC055811.4-201ENST00000624039 1754 ntBASIC15.7■□□□□ 0.1
VCPP55072 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VCPP55072 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VCPP55072 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.7■□□□□ 0.1
VCPP55072 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.7■□□□□ 0.1
VCPP55072 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VCPP55072 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VCPP55072 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VCPP55072 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VCPP55072 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VCPP55072 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
VCPP55072 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
VCPP55072 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
VCPP55072 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
VCPP55072 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VCPP55072 AL645937.2-201ENST00000396808 931 ntBASIC15.7■□□□□ 0.1
VCPP55072 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VCPP55072 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VCPP55072 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VCPP55072 NOC2LP1-201ENST00000450578 752 ntBASIC15.7■□□□□ 0.1
VCPP55072 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
VCPP55072 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC15.7■□□□□ 0.1
VCPP55072 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC15.7■□□□□ 0.1
VCPP55072 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
VCPP55072 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC15.7■□□□□ 0.1
VCPP55072 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VCPP55072 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
VCPP55072 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VCPP55072 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VCPP55072 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VCPP55072 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VCPP55072 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
VCPP55072 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
VCPP55072 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
VCPP55072 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
VCPP55072 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VCPP55072 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
VCPP55072 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
VCPP55072 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.69■□□□□ 0.1
VCPP55072 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VCPP55072 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VCPP55072 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VCPP55072 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.69■□□□□ 0.1
VCPP55072 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VCPP55072 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC15.69■□□□□ 0.1
VCPP55072 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VCPP55072 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VCPP55072 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15.69■□□□□ 0.1
VCPP55072 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.69■□□□□ 0.1
VCPP55072 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
VCPP55072 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
VCPP55072 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VCPP55072 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
VCPP55072 RPSAP31-201ENST00000416648 895 ntBASIC15.69■□□□□ 0.1
VCPP55072 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC15.69■□□□□ 0.1
VCPP55072 PPOX-204ENST00000462866 473 ntTSL 5 BASIC15.69■□□□□ 0.1
VCPP55072 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
VCPP55072 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms