Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PSMD4P55036 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PSMD4P55036 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PSMD4P55036 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
PSMD4P55036 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
PSMD4P55036 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.69□□□□□ -0.22
PSMD4P55036 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
PSMD4P55036 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.69□□□□□ -0.22
PSMD4P55036 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.69□□□□□ -0.22
PSMD4P55036 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PSMD4P55036 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PSMD4P55036 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PSMD4P55036 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PSMD4P55036 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.69□□□□□ -0.22
PSMD4P55036 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
PSMD4P55036 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
PSMD4P55036 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
PSMD4P55036 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
PSMD4P55036 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
PSMD4P55036 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PSMD4P55036 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
PSMD4P55036 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
PSMD4P55036 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PSMD4P55036 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PSMD4P55036 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.68□□□□□ -0.22
PSMD4P55036 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PSMD4P55036 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PSMD4P55036 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
PSMD4P55036 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
PSMD4P55036 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
PSMD4P55036 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC13.68□□□□□ -0.22
PSMD4P55036 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.68□□□□□ -0.22
PSMD4P55036 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC13.68□□□□□ -0.22
PSMD4P55036 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC13.68□□□□□ -0.22
PSMD4P55036 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC13.68□□□□□ -0.22
PSMD4P55036 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PSMD4P55036 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
PSMD4P55036 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
PSMD4P55036 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC13.68□□□□□ -0.22
PSMD4P55036 AC017083.2-201ENST00000608069 979 ntBASIC13.68□□□□□ -0.22
PSMD4P55036 AC133552.6-201ENST00000613406 534 ntBASIC13.68□□□□□ -0.22
PSMD4P55036 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.68□□□□□ -0.22
PSMD4P55036 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PSMD4P55036 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
PSMD4P55036 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
PSMD4P55036 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PSMD4P55036 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
PSMD4P55036 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PSMD4P55036 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PSMD4P55036 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC13.68□□□□□ -0.22
PSMD4P55036 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
PSMD4P55036 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
PSMD4P55036 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PSMD4P55036 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.68□□□□□ -0.22
PSMD4P55036 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.68□□□□□ -0.22
PSMD4P55036 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PSMD4P55036 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PSMD4P55036 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
PSMD4P55036 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PSMD4P55036 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
PSMD4P55036 INE2-201ENST00000630399 1874 ntBASIC13.67□□□□□ -0.22
PSMD4P55036 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.67□□□□□ -0.22
PSMD4P55036 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PSMD4P55036 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
PSMD4P55036 MYADML-201ENST00000474610 2147 ntBASIC13.67□□□□□ -0.22
PSMD4P55036 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
PSMD4P55036 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
PSMD4P55036 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PSMD4P55036 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
PSMD4P55036 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PSMD4P55036 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
PSMD4P55036 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PSMD4P55036 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
PSMD4P55036 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
PSMD4P55036 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PSMD4P55036 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PSMD4P55036 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
PSMD4P55036 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
PSMD4P55036 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
PSMD4P55036 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.67□□□□□ -0.22
PSMD4P55036 AC015656.1-201ENST00000624209 3578 ntBASIC13.67□□□□□ -0.22
PSMD4P55036 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PSMD4P55036 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PSMD4P55036 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PSMD4P55036 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PSMD4P55036 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC13.67□□□□□ -0.22
PSMD4P55036 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
PSMD4P55036 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
PSMD4P55036 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
PSMD4P55036 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PSMD4P55036 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
PSMD4P55036 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC13.67□□□□□ -0.22
PSMD4P55036 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC13.67□□□□□ -0.22
PSMD4P55036 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC13.67□□□□□ -0.22
PSMD4P55036 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC13.67□□□□□ -0.22
PSMD4P55036 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
PSMD4P55036 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.67□□□□□ -0.22
PSMD4P55036 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC13.67□□□□□ -0.22
PSMD4P55036 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC13.67□□□□□ -0.22
PSMD4P55036 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms