Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
NKX2-1P43699 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
NKX2-1P43699 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
NKX2-1P43699 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
NKX2-1P43699 SPDYE7P-202ENST00000420373 878 ntBASIC12.05□□□□□ -0.48
NKX2-1P43699 AL353779.1-201ENST00000434793 351 ntBASIC12.05□□□□□ -0.48
NKX2-1P43699 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC12.05□□□□□ -0.48
NKX2-1P43699 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC12.05□□□□□ -0.48
NKX2-1P43699 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC12.05□□□□□ -0.48
NKX2-1P43699 RN7SL618P-201ENST00000477850 296 ntBASIC12.05□□□□□ -0.48
NKX2-1P43699 SATB1-217ENST00000493952 626 ntTSL 3 BASIC12.05□□□□□ -0.48
NKX2-1P43699 AP000344.2-201ENST00000512987 629 ntBASIC12.05□□□□□ -0.48
NKX2-1P43699 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC12.05□□□□□ -0.48
NKX2-1P43699 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC12.05□□□□□ -0.48
NKX2-1P43699 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC12.05□□□□□ -0.48
NKX2-1P43699 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC12.05□□□□□ -0.48
NKX2-1P43699 MIR4469-201ENST00000583919 79 ntBASIC12.05□□□□□ -0.48
NKX2-1P43699 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC12.05□□□□□ -0.48
NKX2-1P43699 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
NKX2-1P43699 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC12.05□□□□□ -0.48
NKX2-1P43699 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
NKX2-1P43699 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC12.05□□□□□ -0.48
NKX2-1P43699 AL513210.1-201ENST00000629608 234 ntBASIC12.05□□□□□ -0.48
NKX2-1P43699 AL157996.1-201ENST00000624684 2299 ntBASIC12.05□□□□□ -0.48
NKX2-1P43699 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NKX2-1P43699 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
NKX2-1P43699 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
NKX2-1P43699 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
NKX2-1P43699 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC12.05□□□□□ -0.48
NKX2-1P43699 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
NKX2-1P43699 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
NKX2-1P43699 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
NKX2-1P43699 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NKX2-1P43699 AC083964.2-201ENST00000623988 2396 ntBASIC12.05□□□□□ -0.48
NKX2-1P43699 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC12.05□□□□□ -0.48
NKX2-1P43699 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
NKX2-1P43699 SALL4P5-201ENST00000419001 1760 ntBASIC12.05□□□□□ -0.48
NKX2-1P43699 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC12.05□□□□□ -0.48
NKX2-1P43699 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC12.05□□□□□ -0.48
NKX2-1P43699 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NKX2-1P43699 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
NKX2-1P43699 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
NKX2-1P43699 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NKX2-1P43699 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NKX2-1P43699 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC12.04□□□□□ -0.48
NKX2-1P43699 AC015688.4-201ENST00000580780 1647 ntBASIC12.04□□□□□ -0.48
NKX2-1P43699 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC12.04□□□□□ -0.48
NKX2-1P43699 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
NKX2-1P43699 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
NKX2-1P43699 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC12.04□□□□□ -0.48
NKX2-1P43699 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NKX2-1P43699 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
NKX2-1P43699 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
NKX2-1P43699 TP73-201ENST00000346387 4854 ntTSL 5 BASIC12.04□□□□□ -0.48
NKX2-1P43699 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC12.04□□□□□ -0.48
NKX2-1P43699 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
NKX2-1P43699 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC12.04□□□□□ -0.48
NKX2-1P43699 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
NKX2-1P43699 RPL37AP1-201ENST00000412502 279 ntBASIC12.04□□□□□ -0.48
NKX2-1P43699 UPF3AP3-201ENST00000420996 769 ntBASIC12.04□□□□□ -0.48
NKX2-1P43699 GPS2P2-201ENST00000430745 888 ntBASIC12.04□□□□□ -0.48
NKX2-1P43699 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NKX2-1P43699 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC12.04□□□□□ -0.48
NKX2-1P43699 SDHAP3-202ENST00000515467 728 ntBASIC12.04□□□□□ -0.48
NKX2-1P43699 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
NKX2-1P43699 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC12.04□□□□□ -0.48
NKX2-1P43699 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC12.04□□□□□ -0.48
NKX2-1P43699 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC12.04□□□□□ -0.48
NKX2-1P43699 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
NKX2-1P43699 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC12.04□□□□□ -0.48
NKX2-1P43699 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
NKX2-1P43699 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
NKX2-1P43699 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
NKX2-1P43699 RAB34-224ENST00000636513 888 ntTSL 5 BASIC12.04□□□□□ -0.48
NKX2-1P43699 AL109936.8-201ENST00000641772 604 ntBASIC12.04□□□□□ -0.48
NKX2-1P43699 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NKX2-1P43699 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NKX2-1P43699 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC12.04□□□□□ -0.48
NKX2-1P43699 AL805961.2-201ENST00000642139 4817 ntBASIC12.04□□□□□ -0.48
NKX2-1P43699 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC12.04□□□□□ -0.48
NKX2-1P43699 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
NKX2-1P43699 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NKX2-1P43699 TUBB3P1-201ENST00000405796 1332 ntBASIC12.04□□□□□ -0.48
NKX2-1P43699 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
NKX2-1P43699 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
NKX2-1P43699 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC12.04□□□□□ -0.48
NKX2-1P43699 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC12.04□□□□□ -0.48
NKX2-1P43699 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
NKX2-1P43699 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
NKX2-1P43699 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
NKX2-1P43699 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC12.04□□□□□ -0.48
NKX2-1P43699 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NKX2-1P43699 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
NKX2-1P43699 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
NKX2-1P43699 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC12.04□□□□□ -0.48
NKX2-1P43699 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC12.04□□□□□ -0.48
NKX2-1P43699 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NKX2-1P43699 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
NKX2-1P43699 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
NKX2-1P43699 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms