Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
CXCL5P42830 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
CXCL5P42830 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC9.95□□□□□ -0.82
CXCL5P42830 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC9.95□□□□□ -0.82
CXCL5P42830 INF2-202ENST00000330634 7578 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
CXCL5P42830 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
CXCL5P42830 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
CXCL5P42830 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
CXCL5P42830 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC9.95□□□□□ -0.82
CXCL5P42830 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
CXCL5P42830 RAD18-204ENST00000418463 563 ntTSL 4 BASIC9.95□□□□□ -0.82
CXCL5P42830 RAD18-205ENST00000421052 582 ntTSL 3 BASIC9.95□□□□□ -0.82
CXCL5P42830 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC9.95□□□□□ -0.82
CXCL5P42830 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC9.95□□□□□ -0.82
CXCL5P42830 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC9.95□□□□□ -0.82
CXCL5P42830 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC9.95□□□□□ -0.82
CXCL5P42830 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
CXCL5P42830 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
CXCL5P42830 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
CXCL5P42830 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC9.95□□□□□ -0.82
CXCL5P42830 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
CXCL5P42830 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
CXCL5P42830 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC9.95□□□□□ -0.82
CXCL5P42830 AL158212.4-201ENST00000624062 1286 ntBASIC9.95□□□□□ -0.82
CXCL5P42830 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC9.95□□□□□ -0.82
CXCL5P42830 AC087499.5-201ENST00000452760 1342 ntBASIC9.95□□□□□ -0.82
CXCL5P42830 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
CXCL5P42830 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
CXCL5P42830 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
CXCL5P42830 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
CXCL5P42830 AC020910.6-201ENST00000623084 1459 ntBASIC9.95□□□□□ -0.82
CXCL5P42830 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
CXCL5P42830 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
CXCL5P42830 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
CXCL5P42830 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC9.95□□□□□ -0.82
CXCL5P42830 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
CXCL5P42830 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC9.95□□□□□ -0.82
CXCL5P42830 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC9.95□□□□□ -0.82
CXCL5P42830 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC9.95□□□□□ -0.82
CXCL5P42830 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
CXCL5P42830 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
CXCL5P42830 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC9.95□□□□□ -0.82
CXCL5P42830 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
CXCL5P42830 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC9.95□□□□□ -0.82
CXCL5P42830 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
CXCL5P42830 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
CXCL5P42830 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
CXCL5P42830 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC9.95□□□□□ -0.82
CXCL5P42830 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
CXCL5P42830 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
CXCL5P42830 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
CXCL5P42830 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC9.95□□□□□ -0.82
CXCL5P42830 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
CXCL5P42830 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
CXCL5P42830 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC9.95□□□□□ -0.82
CXCL5P42830 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
CXCL5P42830 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC9.94□□□□□ -0.82
CXCL5P42830 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
CXCL5P42830 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC9.94□□□□□ -0.82
CXCL5P42830 NQO2-205ENST00000380455 10084 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
CXCL5P42830 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
CXCL5P42830 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
CXCL5P42830 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC9.94□□□□□ -0.82
CXCL5P42830 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
CXCL5P42830 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
CXCL5P42830 WARS-203ENST00000358655 2466 ntTSL 2 BASIC9.94□□□□□ -0.82
CXCL5P42830 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
CXCL5P42830 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
CXCL5P42830 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC9.94□□□□□ -0.82
CXCL5P42830 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
CXCL5P42830 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
CXCL5P42830 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
CXCL5P42830 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
CXCL5P42830 TBL1X-203ENST00000407597 5596 ntTSL 2 BASIC9.94□□□□□ -0.82
CXCL5P42830 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
CXCL5P42830 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
CXCL5P42830 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC9.94□□□□□ -0.82
CXCL5P42830 AL138799.1-201ENST00000448213 1675 ntBASIC9.94□□□□□ -0.82
CXCL5P42830 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
CXCL5P42830 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
CXCL5P42830 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
CXCL5P42830 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
CXCL5P42830 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
CXCL5P42830 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC9.94□□□□□ -0.82
CXCL5P42830 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
CXCL5P42830 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
CXCL5P42830 BTBD7P1-201ENST00000447253 1453 ntBASIC9.94□□□□□ -0.82
CXCL5P42830 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
CXCL5P42830 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
CXCL5P42830 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
CXCL5P42830 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
CXCL5P42830 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
CXCL5P42830 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
CXCL5P42830 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
CXCL5P42830 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
CXCL5P42830 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC9.94□□□□□ -0.82
CXCL5P42830 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC9.94□□□□□ -0.82
CXCL5P42830 AC007969.1-201ENST00000433675 447 ntBASIC9.94□□□□□ -0.82
CXCL5P42830 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC9.94□□□□□ -0.82
CXCL5P42830 MEIS3P1-201ENST00000495167 958 ntBASIC9.94□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms