Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC16.67■□□□□ 0.26
COPB2P35606 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
COPB2P35606 AL591471.1-201ENST00000621855 229 ntBASIC16.67■□□□□ 0.26
COPB2P35606 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC16.67■□□□□ 0.26
COPB2P35606 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COPB2P35606 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
COPB2P35606 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COPB2P35606 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COPB2P35606 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COPB2P35606 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
COPB2P35606 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
COPB2P35606 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
COPB2P35606 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
COPB2P35606 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
COPB2P35606 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
COPB2P35606 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
COPB2P35606 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
COPB2P35606 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
COPB2P35606 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
COPB2P35606 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COPB2P35606 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COPB2P35606 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COPB2P35606 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COPB2P35606 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COPB2P35606 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC16.66■□□□□ 0.26
COPB2P35606 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC16.66■□□□□ 0.26
COPB2P35606 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
COPB2P35606 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC16.66■□□□□ 0.26
COPB2P35606 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC16.66■□□□□ 0.26
COPB2P35606 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC16.66■□□□□ 0.26
COPB2P35606 AL807761.2-201ENST00000422849 729 ntBASIC16.66■□□□□ 0.26
COPB2P35606 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC16.66■□□□□ 0.26
COPB2P35606 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC16.66■□□□□ 0.26
COPB2P35606 FOS-204ENST00000554617 796 ntTSL 2 BASIC16.66■□□□□ 0.26
COPB2P35606 AL022334.2-201ENST00000610000 484 ntBASIC16.66■□□□□ 0.26
COPB2P35606 AC087392.5-201ENST00000612517 489 ntBASIC16.66■□□□□ 0.26
COPB2P35606 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC16.66■□□□□ 0.26
COPB2P35606 AC009560.1-201ENST00000620208 434 ntBASIC16.66■□□□□ 0.26
COPB2P35606 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
COPB2P35606 YRDCP1-201ENST00000621419 643 ntBASIC16.66■□□□□ 0.26
COPB2P35606 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
COPB2P35606 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
COPB2P35606 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
COPB2P35606 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COPB2P35606 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC16.66■□□□□ 0.26
COPB2P35606 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
COPB2P35606 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
COPB2P35606 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
COPB2P35606 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC16.66■□□□□ 0.26
COPB2P35606 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COPB2P35606 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
COPB2P35606 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.66■□□□□ 0.26
COPB2P35606 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COPB2P35606 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COPB2P35606 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COPB2P35606 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
COPB2P35606 AC007686.3-201ENST00000619017 3487 ntBASIC16.65■□□□□ 0.26
COPB2P35606 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
COPB2P35606 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COPB2P35606 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC16.65■□□□□ 0.26
COPB2P35606 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COPB2P35606 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
COPB2P35606 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COPB2P35606 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
COPB2P35606 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COPB2P35606 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COPB2P35606 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
COPB2P35606 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
COPB2P35606 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
COPB2P35606 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
COPB2P35606 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC16.65■□□□□ 0.26
COPB2P35606 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC16.65■□□□□ 0.26
COPB2P35606 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC16.65■□□□□ 0.26
COPB2P35606 RN7SL81P-201ENST00000493781 261 ntBASIC16.65■□□□□ 0.26
COPB2P35606 MBP-227ENST00000526111 581 ntTSL 4 BASIC16.65■□□□□ 0.26
COPB2P35606 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC16.65■□□□□ 0.26
COPB2P35606 MIR4750-201ENST00000584564 56 ntBASIC16.65■□□□□ 0.26
COPB2P35606 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
COPB2P35606 AC007326.1-201ENST00000604539 458 ntBASIC16.65■□□□□ 0.26
COPB2P35606 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC16.65■□□□□ 0.26
COPB2P35606 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COPB2P35606 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
COPB2P35606 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COPB2P35606 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COPB2P35606 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
COPB2P35606 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.65■□□□□ 0.26
COPB2P35606 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
COPB2P35606 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC16.65■□□□□ 0.26
COPB2P35606 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
COPB2P35606 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
COPB2P35606 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC16.64■□□□□ 0.26
COPB2P35606 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
COPB2P35606 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COPB2P35606 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
COPB2P35606 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
COPB2P35606 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC16.64■□□□□ 0.25
COPB2P35606 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
COPB2P35606 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC16.64■□□□□ 0.25
COPB2P35606 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COPB2P35606 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms