Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
KRT9P35527 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC16.06■□□□□ 0.16
KRT9P35527 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
KRT9P35527 HPD-204ENST00000543163 1709 ntTSL 5 BASIC16.06■□□□□ 0.16
KRT9P35527 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC16.06■□□□□ 0.16
KRT9P35527 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC16.06■□□□□ 0.16
KRT9P35527 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KRT9P35527 AC015818.8-201ENST00000587907 1519 ntBASIC16.06■□□□□ 0.16
KRT9P35527 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC16.06■□□□□ 0.16
KRT9P35527 AL138725.1-201ENST00000407347 1314 ntBASIC16.06■□□□□ 0.16
KRT9P35527 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
KRT9P35527 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KRT9P35527 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KRT9P35527 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
KRT9P35527 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.06■□□□□ 0.16
KRT9P35527 AC098614.1-201ENST00000368528 745 ntBASIC16.06■□□□□ 0.16
KRT9P35527 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
KRT9P35527 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
KRT9P35527 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
KRT9P35527 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.06■□□□□ 0.16
KRT9P35527 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
KRT9P35527 AC011495.1-201ENST00000498085 584 ntBASIC16.06■□□□□ 0.16
KRT9P35527 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC16.06■□□□□ 0.16
KRT9P35527 NEU3-203ENST00000529024 581 ntTSL 3 BASIC16.06■□□□□ 0.16
KRT9P35527 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
KRT9P35527 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
KRT9P35527 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
KRT9P35527 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.06■□□□□ 0.16
KRT9P35527 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
KRT9P35527 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC16.06■□□□□ 0.16
KRT9P35527 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
KRT9P35527 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KRT9P35527 AC111170.3-201ENST00000624282 2464 ntBASIC16.06■□□□□ 0.16
KRT9P35527 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC16.06■□□□□ 0.16
KRT9P35527 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
KRT9P35527 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KRT9P35527 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
KRT9P35527 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
KRT9P35527 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC16.05■□□□□ 0.16
KRT9P35527 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
KRT9P35527 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KRT9P35527 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KRT9P35527 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KRT9P35527 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KRT9P35527 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
KRT9P35527 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
KRT9P35527 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
KRT9P35527 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
KRT9P35527 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KRT9P35527 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KRT9P35527 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC16.05■□□□□ 0.16
KRT9P35527 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
KRT9P35527 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KRT9P35527 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KRT9P35527 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
KRT9P35527 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
KRT9P35527 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
KRT9P35527 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
KRT9P35527 ACTG1P3-201ENST00000431775 1114 ntBASIC16.05■□□□□ 0.16
KRT9P35527 RN7SL752P-201ENST00000463779 287 ntBASIC16.05■□□□□ 0.16
KRT9P35527 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16.05■□□□□ 0.16
KRT9P35527 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC16.05■□□□□ 0.16
KRT9P35527 TDH-203ENST00000531764 1110 ntBASIC16.05■□□□□ 0.16
KRT9P35527 PTP4A1P2-201ENST00000546033 454 ntBASIC16.05■□□□□ 0.16
KRT9P35527 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
KRT9P35527 PIGL-212ENST00000581006 554 ntTSL 4 BASIC16.05■□□□□ 0.16
KRT9P35527 AC025048.6-201ENST00000634326 1161 ntBASIC16.05■□□□□ 0.16
KRT9P35527 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
KRT9P35527 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
KRT9P35527 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
KRT9P35527 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KRT9P35527 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
KRT9P35527 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC16.05■□□□□ 0.16
KRT9P35527 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC16.05■□□□□ 0.16
KRT9P35527 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
KRT9P35527 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
KRT9P35527 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
KRT9P35527 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
KRT9P35527 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KRT9P35527 FAM90A12P-201ENST00000519497 2375 ntBASIC16.05■□□□□ 0.16
KRT9P35527 FAM90A24P-201ENST00000520792 2369 ntBASIC16.05■□□□□ 0.16
KRT9P35527 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC16.05■□□□□ 0.16
KRT9P35527 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC16.04■□□□□ 0.16
KRT9P35527 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
KRT9P35527 CICP8-201ENST00000455800 2813 ntBASIC16.04■□□□□ 0.16
KRT9P35527 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
KRT9P35527 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
KRT9P35527 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC16.04■□□□□ 0.16
KRT9P35527 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC16.04■□□□□ 0.16
KRT9P35527 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KRT9P35527 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
KRT9P35527 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
KRT9P35527 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KRT9P35527 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KRT9P35527 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
KRT9P35527 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC16.04■□□□□ 0.16
KRT9P35527 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
KRT9P35527 AC134312.5-201ENST00000568031 1313 ntBASIC16.04■□□□□ 0.16
KRT9P35527 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
KRT9P35527 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms