Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
USP6P35125 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
USP6P35125 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
USP6P35125 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
USP6P35125 COX20P1-201ENST00000366529 357 ntBASIC19.28■□□□□ 0.68
USP6P35125 STK24P1-201ENST00000455035 1291 ntBASIC19.28■□□□□ 0.68
USP6P35125 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
USP6P35125 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC19.28■□□□□ 0.68
USP6P35125 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC19.28■□□□□ 0.68
USP6P35125 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC19.28■□□□□ 0.68
USP6P35125 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC19.28■□□□□ 0.68
USP6P35125 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
USP6P35125 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC19.28■□□□□ 0.68
USP6P35125 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
USP6P35125 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
USP6P35125 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
USP6P35125 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
USP6P35125 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC19.28■□□□□ 0.68
USP6P35125 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
USP6P35125 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
USP6P35125 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
USP6P35125 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
USP6P35125 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC19.28■□□□□ 0.68
USP6P35125 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC19.28■□□□□ 0.68
USP6P35125 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
USP6P35125 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC19.28■□□□□ 0.68
USP6P35125 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC19.28■□□□□ 0.68
USP6P35125 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
USP6P35125 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
USP6P35125 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
USP6P35125 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC19.27■□□□□ 0.68
USP6P35125 FAM90A21P-201ENST00000510875 1396 ntBASIC19.27■□□□□ 0.68
USP6P35125 FAM90A15P-201ENST00000514465 1395 ntBASIC19.27■□□□□ 0.68
USP6P35125 FAM90A6P-201ENST00000515148 1394 ntBASIC19.27■□□□□ 0.68
USP6P35125 FAM90A16P-201ENST00000526662 1395 ntBASIC19.27■□□□□ 0.68
USP6P35125 FAM90A9P-201ENST00000527940 1395 ntBASIC19.27■□□□□ 0.68
USP6P35125 FAM90A5P-201ENST00000528738 1395 ntBASIC19.27■□□□□ 0.68
USP6P35125 FAM90A14P-201ENST00000530386 1395 ntBASIC19.27■□□□□ 0.68
USP6P35125 FAM90A13P-201ENST00000534703 1395 ntBASIC19.27■□□□□ 0.68
USP6P35125 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
USP6P35125 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
USP6P35125 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC19.27■□□□□ 0.68
USP6P35125 KRT17P4-201ENST00000429445 819 ntBASIC19.27■□□□□ 0.68
USP6P35125 RN7SL375P-201ENST00000492442 298 ntBASIC19.27■□□□□ 0.68
USP6P35125 FOXN3-AS2-201ENST00000554071 1262 ntBASIC19.27■□□□□ 0.68
USP6P35125 DNM1P51-201ENST00000558149 522 ntBASIC19.27■□□□□ 0.68
USP6P35125 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
USP6P35125 AL009176.1-201ENST00000607876 650 ntBASIC19.27■□□□□ 0.68
USP6P35125 AC006483.2-201ENST00000609813 515 ntBASIC19.27■□□□□ 0.68
USP6P35125 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
USP6P35125 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
USP6P35125 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
USP6P35125 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
USP6P35125 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
USP6P35125 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
USP6P35125 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC19.27■□□□□ 0.67
USP6P35125 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
USP6P35125 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
USP6P35125 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC19.27■□□□□ 0.67
USP6P35125 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP6P35125 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
USP6P35125 NME4-203ENST00000397722 1232 ntTSL 2 BASIC19.26■□□□□ 0.67
USP6P35125 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC19.26■□□□□ 0.67
USP6P35125 EEF1GP8-201ENST00000506566 1154 ntBASIC19.26■□□□□ 0.67
USP6P35125 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
USP6P35125 KRT18P37-201ENST00000520711 1282 ntBASIC19.26■□□□□ 0.67
USP6P35125 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC19.26■□□□□ 0.67
USP6P35125 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC19.26■□□□□ 0.67
USP6P35125 AC008972.2-201ENST00000606587 494 ntBASIC19.26■□□□□ 0.67
USP6P35125 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP6P35125 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP6P35125 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC19.26■□□□□ 0.67
USP6P35125 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP6P35125 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
USP6P35125 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP6P35125 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP6P35125 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP6P35125 GOLGA8UP-201ENST00000527159 1755 ntBASIC19.26■□□□□ 0.67
USP6P35125 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP6P35125 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC19.26■□□□□ 0.67
USP6P35125 AL022313.4-201ENST00000562756 2046 ntBASIC19.26■□□□□ 0.67
USP6P35125 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP6P35125 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
USP6P35125 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
USP6P35125 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP6P35125 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP6P35125 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
USP6P35125 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP6P35125 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
USP6P35125 EEF1DP2-201ENST00000433698 843 ntBASIC19.25■□□□□ 0.67
USP6P35125 TREHP1-201ENST00000531328 465 ntBASIC19.25■□□□□ 0.67
USP6P35125 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC19.25■□□□□ 0.67
USP6P35125 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
USP6P35125 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC19.25■□□□□ 0.67
USP6P35125 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC19.25■□□□□ 0.67
USP6P35125 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC19.25■□□□□ 0.67
USP6P35125 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP6P35125 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC19.25■□□□□ 0.67
USP6P35125 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP6P35125 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms