Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC16.96■□□□□ 0.31
COL4A5P29400 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC16.96■□□□□ 0.31
COL4A5P29400 AC009950.1-210ENST00000594622 553 ntTSL 3 BASIC16.96■□□□□ 0.31
COL4A5P29400 KF455155.1-201ENST00000604493 303 ntBASIC16.96■□□□□ 0.31
COL4A5P29400 AC020904.3-201ENST00000624199 442 ntBASIC16.96■□□□□ 0.31
COL4A5P29400 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC16.96■□□□□ 0.31
COL4A5P29400 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC16.96■□□□□ 0.31
COL4A5P29400 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COL4A5P29400 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.96■□□□□ 0.31
COL4A5P29400 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC16.96■□□□□ 0.31
COL4A5P29400 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
COL4A5P29400 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
COL4A5P29400 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
COL4A5P29400 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COL4A5P29400 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COL4A5P29400 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.96■□□□□ 0.31
COL4A5P29400 AC006486.2-201ENST00000624246 2199 ntBASIC16.96■□□□□ 0.3
COL4A5P29400 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
COL4A5P29400 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC16.96■□□□□ 0.3
COL4A5P29400 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC16.95■□□□□ 0.3
COL4A5P29400 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.95■□□□□ 0.3
COL4A5P29400 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC16.95■□□□□ 0.3
COL4A5P29400 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC16.95■□□□□ 0.3
COL4A5P29400 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL4A5P29400 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
COL4A5P29400 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL4A5P29400 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
COL4A5P29400 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COL4A5P29400 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
COL4A5P29400 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
COL4A5P29400 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL4A5P29400 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL4A5P29400 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC16.95■□□□□ 0.3
COL4A5P29400 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC16.95■□□□□ 0.3
COL4A5P29400 AL121987.1-201ENST00000435580 645 ntTSL 3 BASIC16.95■□□□□ 0.3
COL4A5P29400 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC16.95■□□□□ 0.3
COL4A5P29400 Z82249.1-201ENST00000453866 568 ntTSL 4 BASIC16.95■□□□□ 0.3
COL4A5P29400 HNRNPA3P6-201ENST00000472163 1006 ntBASIC16.95■□□□□ 0.3
COL4A5P29400 CD81-209ENST00000492627 886 ntTSL 3 BASIC16.95■□□□□ 0.3
COL4A5P29400 MIR2278-201ENST00000516344 96 ntBASIC16.95■□□□□ 0.3
COL4A5P29400 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC16.95■□□□□ 0.3
COL4A5P29400 C11orf1-202ENST00000528125 534 ntTSL 2 BASIC16.95■□□□□ 0.3
COL4A5P29400 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC16.95■□□□□ 0.3
COL4A5P29400 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC16.95■□□□□ 0.3
COL4A5P29400 AC019294.2-203ENST00000569596 594 ntTSL 3 BASIC16.95■□□□□ 0.3
COL4A5P29400 AC132825.4-202ENST00000578792 434 ntBASIC16.95■□□□□ 0.3
COL4A5P29400 MIR4254-201ENST00000581063 76 ntBASIC16.95■□□□□ 0.3
COL4A5P29400 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
COL4A5P29400 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC16.95■□□□□ 0.3
COL4A5P29400 AC233280.19-201ENST00000633223 136 ntBASIC16.95■□□□□ 0.3
COL4A5P29400 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL4A5P29400 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.95■□□□□ 0.3
COL4A5P29400 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC16.95■□□□□ 0.3
COL4A5P29400 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL4A5P29400 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL4A5P29400 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL4A5P29400 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COL4A5P29400 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COL4A5P29400 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC16.95■□□□□ 0.3
COL4A5P29400 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL4A5P29400 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COL4A5P29400 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COL4A5P29400 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
COL4A5P29400 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
COL4A5P29400 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC16.95■□□□□ 0.3
COL4A5P29400 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL4A5P29400 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COL4A5P29400 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COL4A5P29400 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC16.94■□□□□ 0.3
COL4A5P29400 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
COL4A5P29400 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
COL4A5P29400 HHLA3-202ENST00000361764 692 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
COL4A5P29400 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC16.94■□□□□ 0.3
COL4A5P29400 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC16.94■□□□□ 0.3
COL4A5P29400 FDPSP7-201ENST00000429043 1054 ntBASIC16.94■□□□□ 0.3
COL4A5P29400 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
COL4A5P29400 VDAC1P11-201ENST00000458323 852 ntBASIC16.94■□□□□ 0.3
COL4A5P29400 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC16.94■□□□□ 0.3
COL4A5P29400 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC16.94■□□□□ 0.3
COL4A5P29400 AAMDC-207ENST00000527134 693 ntTSL 3 BASIC16.94■□□□□ 0.3
COL4A5P29400 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC16.94■□□□□ 0.3
COL4A5P29400 SRP14-208ENST00000560773 468 ntTSL 3 BASIC16.94■□□□□ 0.3
COL4A5P29400 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC16.94■□□□□ 0.3
COL4A5P29400 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC16.94■□□□□ 0.3
COL4A5P29400 HAMP-203ENST00000598398 652 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
COL4A5P29400 AC113385.2-201ENST00000614465 762 ntBASIC16.94■□□□□ 0.3
COL4A5P29400 AC005746.3-201ENST00000614751 393 ntBASIC16.94■□□□□ 0.3
COL4A5P29400 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC16.94■□□□□ 0.3
COL4A5P29400 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
COL4A5P29400 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.94■□□□□ 0.3
COL4A5P29400 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
COL4A5P29400 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC16.94■□□□□ 0.3
COL4A5P29400 AC020931.1-201ENST00000589622 1346 ntBASIC16.94■□□□□ 0.3
COL4A5P29400 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL4A5P29400 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.94■□□□□ 0.3
COL4A5P29400 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.94■□□□□ 0.3
COL4A5P29400 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL4A5P29400 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL4A5P29400 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL4A5P29400 AC092115.1-201ENST00000566277 1402 ntBASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms