Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
EPHA3P29320 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC14.3□□□□□ -0.12
EPHA3P29320 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
EPHA3P29320 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
EPHA3P29320 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
EPHA3P29320 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
EPHA3P29320 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
EPHA3P29320 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
EPHA3P29320 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
EPHA3P29320 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
EPHA3P29320 AC139712.1-201ENST00000378256 1875 ntBASIC14.29□□□□□ -0.12
EPHA3P29320 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
EPHA3P29320 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
EPHA3P29320 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
EPHA3P29320 AC068760.1-201ENST00000493579 1953 ntBASIC14.29□□□□□ -0.12
EPHA3P29320 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
EPHA3P29320 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC14.29□□□□□ -0.12
EPHA3P29320 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
EPHA3P29320 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
EPHA3P29320 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC14.29□□□□□ -0.12
EPHA3P29320 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
EPHA3P29320 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
EPHA3P29320 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
EPHA3P29320 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC14.29□□□□□ -0.12
EPHA3P29320 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
EPHA3P29320 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
EPHA3P29320 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
EPHA3P29320 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.29□□□□□ -0.12
EPHA3P29320 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.29□□□□□ -0.12
EPHA3P29320 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.29□□□□□ -0.12
EPHA3P29320 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
EPHA3P29320 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.29□□□□□ -0.12
EPHA3P29320 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
EPHA3P29320 FO681548.1-201ENST00000455617 1132 ntBASIC14.29□□□□□ -0.12
EPHA3P29320 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.29□□□□□ -0.12
EPHA3P29320 AC004890.2-204ENST00000481968 304 ntBASIC14.29□□□□□ -0.12
EPHA3P29320 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
EPHA3P29320 GCOM2-201ENST00000509133 1104 ntBASIC14.29□□□□□ -0.12
EPHA3P29320 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
EPHA3P29320 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.29□□□□□ -0.12
EPHA3P29320 AC103988.2-201ENST00000561804 725 ntBASIC14.29□□□□□ -0.12
EPHA3P29320 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
EPHA3P29320 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
EPHA3P29320 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.29□□□□□ -0.12
EPHA3P29320 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
EPHA3P29320 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
EPHA3P29320 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
EPHA3P29320 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC14.29□□□□□ -0.12
EPHA3P29320 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
EPHA3P29320 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
EPHA3P29320 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
EPHA3P29320 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
EPHA3P29320 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
EPHA3P29320 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC14.29□□□□□ -0.12
EPHA3P29320 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
EPHA3P29320 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
EPHA3P29320 KHSRPP1-201ENST00000427983 1768 ntBASIC14.29□□□□□ -0.12
EPHA3P29320 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
EPHA3P29320 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
EPHA3P29320 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
EPHA3P29320 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
EPHA3P29320 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
EPHA3P29320 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
EPHA3P29320 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC14.28□□□□□ -0.12
EPHA3P29320 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
EPHA3P29320 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
EPHA3P29320 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
EPHA3P29320 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
EPHA3P29320 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
EPHA3P29320 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
EPHA3P29320 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
EPHA3P29320 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
EPHA3P29320 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
EPHA3P29320 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
EPHA3P29320 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
EPHA3P29320 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
EPHA3P29320 RN7SKP230-201ENST00000365642 335 ntBASIC14.28□□□□□ -0.12
EPHA3P29320 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC14.28□□□□□ -0.12
EPHA3P29320 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
EPHA3P29320 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
EPHA3P29320 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC14.28□□□□□ -0.12
EPHA3P29320 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
EPHA3P29320 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
EPHA3P29320 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC14.28□□□□□ -0.12
EPHA3P29320 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC14.28□□□□□ -0.12
EPHA3P29320 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC14.28□□□□□ -0.12
EPHA3P29320 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
EPHA3P29320 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
EPHA3P29320 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.28□□□□□ -0.12
EPHA3P29320 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
EPHA3P29320 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
EPHA3P29320 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.28□□□□□ -0.12
EPHA3P29320 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
EPHA3P29320 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
EPHA3P29320 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.28□□□□□ -0.12
EPHA3P29320 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
EPHA3P29320 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
EPHA3P29320 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC14.28□□□□□ -0.12
EPHA3P29320 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
EPHA3P29320 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms