Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC17.57■□□□□ 0.4
CHMLP26374 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC17.57■□□□□ 0.4
CHMLP26374 DUX4L45-201ENST00000566406 1057 ntBASIC17.57■□□□□ 0.4
CHMLP26374 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHMLP26374 KLK3-207ENST00000595952 969 ntTSL 3 BASIC17.57■□□□□ 0.4
CHMLP26374 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHMLP26374 AC244157.2-201ENST00000616239 1006 ntBASIC17.57■□□□□ 0.4
CHMLP26374 AL162426.1-201ENST00000624141 743 ntBASIC17.57■□□□□ 0.4
CHMLP26374 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC17.57■□□□□ 0.4
CHMLP26374 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC17.57■□□□□ 0.4
CHMLP26374 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CHMLP26374 AC023794.5-201ENST00000564380 2157 ntBASIC17.57■□□□□ 0.4
CHMLP26374 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CHMLP26374 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CHMLP26374 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHMLP26374 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHMLP26374 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHMLP26374 AGAP10P-201ENST00000454844 2418 ntBASIC17.57■□□□□ 0.4
CHMLP26374 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC17.57■□□□□ 0.4
CHMLP26374 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHMLP26374 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHMLP26374 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHMLP26374 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CHMLP26374 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CHMLP26374 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHMLP26374 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHMLP26374 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CHMLP26374 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CHMLP26374 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC17.56■□□□□ 0.4
CHMLP26374 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHMLP26374 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHMLP26374 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHMLP26374 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHMLP26374 STX1A-203ENST00000395155 783 ntTSL 2 BASIC17.56■□□□□ 0.4
CHMLP26374 AC079178.1-201ENST00000420915 656 ntBASIC17.56■□□□□ 0.4
CHMLP26374 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC17.56■□□□□ 0.4
CHMLP26374 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC17.56■□□□□ 0.4
CHMLP26374 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHMLP26374 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC17.56■□□□□ 0.4
CHMLP26374 ACR-203ENST00000529621 708 ntTSL 5 BASIC17.56■□□□□ 0.4
CHMLP26374 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CHMLP26374 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHMLP26374 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHMLP26374 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHMLP26374 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CHMLP26374 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHMLP26374 AMT-239ENST00000636865 1914 ntTSL 5 BASIC17.56■□□□□ 0.4
CHMLP26374 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHMLP26374 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHMLP26374 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CHMLP26374 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC17.56■□□□□ 0.4
CHMLP26374 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CHMLP26374 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHMLP26374 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC17.55■□□□□ 0.4
CHMLP26374 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC17.55■□□□□ 0.4
CHMLP26374 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CHMLP26374 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CHMLP26374 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHMLP26374 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHMLP26374 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHMLP26374 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHMLP26374 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHMLP26374 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHMLP26374 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHMLP26374 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHMLP26374 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CHMLP26374 AL354877.1-201ENST00000424412 413 ntBASIC17.55■□□□□ 0.4
CHMLP26374 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC17.55■□□□□ 0.4
CHMLP26374 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHMLP26374 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC17.55■□□□□ 0.4
CHMLP26374 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC17.55■□□□□ 0.4
CHMLP26374 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC17.55■□□□□ 0.4
CHMLP26374 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC17.55■□□□□ 0.4
CHMLP26374 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CHMLP26374 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CHMLP26374 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHMLP26374 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC17.55■□□□□ 0.4
CHMLP26374 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHMLP26374 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHMLP26374 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHMLP26374 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHMLP26374 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CHMLP26374 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CHMLP26374 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHMLP26374 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHMLP26374 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHMLP26374 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC17.55■□□□□ 0.4
CHMLP26374 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
CHMLP26374 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CHMLP26374 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHMLP26374 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHMLP26374 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHMLP26374 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC17.55■□□□□ 0.4
CHMLP26374 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC17.55■□□□□ 0.4
CHMLP26374 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHMLP26374 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHMLP26374 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CHMLP26374 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHMLP26374 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHMLP26374 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms