Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LMO1P25800 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC12.3□□□□□ -0.44
LMO1P25800 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC12.3□□□□□ -0.44
LMO1P25800 AP000812.2-201ENST00000538934 718 ntBASIC12.3□□□□□ -0.44
LMO1P25800 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC12.3□□□□□ -0.44
LMO1P25800 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC12.3□□□□□ -0.44
LMO1P25800 C2orf69P2-201ENST00000562032 1123 ntBASIC12.3□□□□□ -0.44
LMO1P25800 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC12.3□□□□□ -0.44
LMO1P25800 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC12.3□□□□□ -0.44
LMO1P25800 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC12.3□□□□□ -0.44
LMO1P25800 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC12.3□□□□□ -0.44
LMO1P25800 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC12.3□□□□□ -0.44
LMO1P25800 AC073413.1-201ENST00000603927 732 ntBASIC12.3□□□□□ -0.44
LMO1P25800 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC12.3□□□□□ -0.44
LMO1P25800 AC027601.3-201ENST00000622907 509 ntBASIC12.3□□□□□ -0.44
LMO1P25800 AC138951.2-201ENST00000623455 1161 ntBASIC12.3□□□□□ -0.44
LMO1P25800 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC12.3□□□□□ -0.44
LMO1P25800 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC12.3□□□□□ -0.44
LMO1P25800 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC12.3□□□□□ -0.44
LMO1P25800 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LMO1P25800 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LMO1P25800 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
LMO1P25800 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
LMO1P25800 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LMO1P25800 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LMO1P25800 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC12.3□□□□□ -0.44
LMO1P25800 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LMO1P25800 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LMO1P25800 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LMO1P25800 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LMO1P25800 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC12.3□□□□□ -0.44
LMO1P25800 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
LMO1P25800 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
LMO1P25800 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LMO1P25800 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LMO1P25800 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC12.3□□□□□ -0.44
LMO1P25800 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LMO1P25800 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC12.3□□□□□ -0.44
LMO1P25800 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
LMO1P25800 KRT8P28-201ENST00000433288 1390 ntBASIC12.3□□□□□ -0.44
LMO1P25800 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LMO1P25800 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
LMO1P25800 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LMO1P25800 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC12.29□□□□□ -0.44
LMO1P25800 AC012617.1-204ENST00000586340 2305 ntBASIC12.29□□□□□ -0.44
LMO1P25800 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LMO1P25800 AC118758.2-201ENST00000614242 2813 ntBASIC12.29□□□□□ -0.44
LMO1P25800 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LMO1P25800 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
LMO1P25800 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC12.29□□□□□ -0.44
LMO1P25800 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC12.29□□□□□ -0.44
LMO1P25800 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
LMO1P25800 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LMO1P25800 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LMO1P25800 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LMO1P25800 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
LMO1P25800 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC12.29□□□□□ -0.44
LMO1P25800 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LMO1P25800 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
LMO1P25800 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
LMO1P25800 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
LMO1P25800 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LMO1P25800 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
LMO1P25800 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LMO1P25800 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LMO1P25800 AL354989.2-201ENST00000435838 1540 ntBASIC12.29□□□□□ -0.44
LMO1P25800 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LMO1P25800 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
LMO1P25800 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC12.29□□□□□ -0.44
LMO1P25800 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
LMO1P25800 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
LMO1P25800 GZMB-202ENST00000382540 816 ntTSL 5 BASIC12.29□□□□□ -0.44
LMO1P25800 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
LMO1P25800 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC12.29□□□□□ -0.44
LMO1P25800 RGS5-214ENST00000429865 754 ntTSL 3 BASIC12.29□□□□□ -0.44
LMO1P25800 ATP5G2P4-201ENST00000442175 420 ntBASIC12.29□□□□□ -0.44
LMO1P25800 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LMO1P25800 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
LMO1P25800 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LMO1P25800 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC12.29□□□□□ -0.44
LMO1P25800 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
LMO1P25800 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
LMO1P25800 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC12.29□□□□□ -0.44
LMO1P25800 NOP2-220ENST00000545915 630 ntTSL 2 BASIC12.29□□□□□ -0.44
LMO1P25800 AC027237.1-201ENST00000560942 655 ntBASIC12.29□□□□□ -0.44
LMO1P25800 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC12.29□□□□□ -0.44
LMO1P25800 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC12.29□□□□□ -0.44
LMO1P25800 AC106886.1-201ENST00000568660 600 ntBASIC12.29□□□□□ -0.44
LMO1P25800 APOC4-201ENST00000591600 348 ntTSL 3 BASIC12.29□□□□□ -0.44
LMO1P25800 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LMO1P25800 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
LMO1P25800 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC12.29□□□□□ -0.44
LMO1P25800 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC12.29□□□□□ -0.44
LMO1P25800 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC12.29□□□□□ -0.44
LMO1P25800 PFAS-212ENST00000625942 396 ntTSL 5 BASIC12.29□□□□□ -0.44
LMO1P25800 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC12.29□□□□□ -0.44
LMO1P25800 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC12.29□□□□□ -0.44
LMO1P25800 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LMO1P25800 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LMO1P25800 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms