Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14.83□□□□□ -0.04
CCND1P24385 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.83□□□□□ -0.04
CCND1P24385 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CCND1P24385 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CCND1P24385 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCND1P24385 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCND1P24385 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCND1P24385 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CCND1P24385 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.04
CCND1P24385 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCND1P24385 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC14.83□□□□□ -0.04
CCND1P24385 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCND1P24385 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC14.83□□□□□ -0.04
CCND1P24385 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCND1P24385 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCND1P24385 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.83□□□□□ -0.04
CCND1P24385 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CCND1P24385 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
CCND1P24385 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCND1P24385 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CCND1P24385 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CCND1P24385 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC14.83□□□□□ -0.04
CCND1P24385 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCND1P24385 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCND1P24385 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCND1P24385 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC14.82□□□□□ -0.04
CCND1P24385 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCND1P24385 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCND1P24385 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCND1P24385 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCND1P24385 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCND1P24385 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCND1P24385 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCND1P24385 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCND1P24385 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CCND1P24385 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCND1P24385 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCND1P24385 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCND1P24385 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCND1P24385 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.82□□□□□ -0.04
CCND1P24385 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
CCND1P24385 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCND1P24385 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.82□□□□□ -0.04
CCND1P24385 AC098850.1-201ENST00000419919 790 ntBASIC14.82□□□□□ -0.04
CCND1P24385 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCND1P24385 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCND1P24385 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.82□□□□□ -0.04
CCND1P24385 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CCND1P24385 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.82□□□□□ -0.04
CCND1P24385 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.82□□□□□ -0.04
CCND1P24385 AL359711.2-201ENST00000563105 872 ntBASIC14.82□□□□□ -0.04
CCND1P24385 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.82□□□□□ -0.04
CCND1P24385 SPDYE22P-201ENST00000582158 798 ntBASIC14.82□□□□□ -0.04
CCND1P24385 AC008494.3-201ENST00000606615 944 ntBASIC14.82□□□□□ -0.04
CCND1P24385 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCND1P24385 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CCND1P24385 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CCND1P24385 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCND1P24385 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCND1P24385 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CCND1P24385 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCND1P24385 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCND1P24385 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC14.82□□□□□ -0.04
CCND1P24385 INE2-201ENST00000630399 1874 ntBASIC14.82□□□□□ -0.04
CCND1P24385 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCND1P24385 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCND1P24385 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CCND1P24385 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CCND1P24385 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCND1P24385 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCND1P24385 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCND1P24385 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.82□□□□□ -0.04
CCND1P24385 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCND1P24385 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCND1P24385 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CCND1P24385 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCND1P24385 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC14.81□□□□□ -0.04
CCND1P24385 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCND1P24385 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CCND1P24385 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCND1P24385 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCND1P24385 AL158070.2-201ENST00000623713 1621 ntBASIC14.81□□□□□ -0.04
CCND1P24385 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCND1P24385 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC14.81□□□□□ -0.04
CCND1P24385 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCND1P24385 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCND1P24385 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCND1P24385 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCND1P24385 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCND1P24385 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCND1P24385 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
CCND1P24385 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.81□□□□□ -0.04
CCND1P24385 FAM90A12P-201ENST00000519497 2375 ntBASIC14.81□□□□□ -0.04
CCND1P24385 FAM90A24P-201ENST00000520792 2369 ntBASIC14.81□□□□□ -0.04
CCND1P24385 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCND1P24385 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC14.81□□□□□ -0.04
CCND1P24385 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.81□□□□□ -0.04
CCND1P24385 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14.81□□□□□ -0.04
CCND1P24385 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCND1P24385 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms