Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TNFSF4P23510 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TNFSF4P23510 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
TNFSF4P23510 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TNFSF4P23510 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TNFSF4P23510 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
TNFSF4P23510 SHC1P1-201ENST00000425230 1745 ntBASIC12.59□□□□□ -0.39
TNFSF4P23510 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
TNFSF4P23510 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
TNFSF4P23510 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TNFSF4P23510 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TNFSF4P23510 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TNFSF4P23510 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TNFSF4P23510 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC12.59□□□□□ -0.39
TNFSF4P23510 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TNFSF4P23510 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TNFSF4P23510 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
TNFSF4P23510 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
TNFSF4P23510 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
TNFSF4P23510 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
TNFSF4P23510 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC12.58□□□□□ -0.39
TNFSF4P23510 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
TNFSF4P23510 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
TNFSF4P23510 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TNFSF4P23510 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TNFSF4P23510 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TNFSF4P23510 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TNFSF4P23510 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TNFSF4P23510 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC12.58□□□□□ -0.4
TNFSF4P23510 AC007292.2-201ENST00000593524 1812 ntBASIC12.58□□□□□ -0.4
TNFSF4P23510 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TNFSF4P23510 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC12.58□□□□□ -0.4
TNFSF4P23510 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
TNFSF4P23510 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC12.58□□□□□ -0.4
TNFSF4P23510 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
TNFSF4P23510 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC12.58□□□□□ -0.4
TNFSF4P23510 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TNFSF4P23510 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
TNFSF4P23510 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TNFSF4P23510 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TNFSF4P23510 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TNFSF4P23510 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TNFSF4P23510 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TNFSF4P23510 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC12.58□□□□□ -0.4
TNFSF4P23510 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
TNFSF4P23510 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TNFSF4P23510 RBM38-204ENST00000371219 760 ntTSL 2 BASIC12.58□□□□□ -0.4
TNFSF4P23510 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
TNFSF4P23510 TISP43-201ENST00000409793 538 ntTSL 4 BASIC12.58□□□□□ -0.4
TNFSF4P23510 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC12.58□□□□□ -0.4
TNFSF4P23510 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC12.58□□□□□ -0.4
TNFSF4P23510 SKA2-202ENST00000437036 625 ntTSL 2 BASIC12.58□□□□□ -0.4
TNFSF4P23510 RPL13AP20-201ENST00000459725 609 ntBASIC12.58□□□□□ -0.4
TNFSF4P23510 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC12.58□□□□□ -0.4
TNFSF4P23510 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TNFSF4P23510 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC12.58□□□□□ -0.4
TNFSF4P23510 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC12.58□□□□□ -0.4
TNFSF4P23510 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC12.58□□□□□ -0.4
TNFSF4P23510 AP003171.2-201ENST00000528208 925 ntBASIC12.58□□□□□ -0.4
TNFSF4P23510 ACR-203ENST00000529621 708 ntTSL 5 BASIC12.58□□□□□ -0.4
TNFSF4P23510 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TNFSF4P23510 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TNFSF4P23510 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC12.58□□□□□ -0.4
TNFSF4P23510 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
TNFSF4P23510 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC12.58□□□□□ -0.4
TNFSF4P23510 AL358472.3-201ENST00000608147 415 ntBASIC12.58□□□□□ -0.4
TNFSF4P23510 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC12.58□□□□□ -0.4
TNFSF4P23510 AP001002.3-201ENST00000623482 206 ntBASIC12.58□□□□□ -0.4
TNFSF4P23510 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC12.58□□□□□ -0.4
TNFSF4P23510 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
TNFSF4P23510 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
TNFSF4P23510 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TNFSF4P23510 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
TNFSF4P23510 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
TNFSF4P23510 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC12.58□□□□□ -0.4
TNFSF4P23510 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
TNFSF4P23510 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
TNFSF4P23510 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC12.58□□□□□ -0.4
TNFSF4P23510 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TNFSF4P23510 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TNFSF4P23510 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC12.58□□□□□ -0.4
TNFSF4P23510 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TNFSF4P23510 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TNFSF4P23510 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
TNFSF4P23510 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TNFSF4P23510 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TNFSF4P23510 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
TNFSF4P23510 SLC4A1-201ENST00000262418 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TNFSF4P23510 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC12.58□□□□□ -0.4
TNFSF4P23510 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
TNFSF4P23510 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TNFSF4P23510 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC12.57□□□□□ -0.4
TNFSF4P23510 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TNFSF4P23510 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
TNFSF4P23510 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TNFSF4P23510 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC12.57□□□□□ -0.4
TNFSF4P23510 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TNFSF4P23510 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TNFSF4P23510 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
TNFSF4P23510 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms