Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.55■□□□□ 0.4
KCNA3P22001 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.55■□□□□ 0.4
KCNA3P22001 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC17.55■□□□□ 0.4
KCNA3P22001 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
KCNA3P22001 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC17.55■□□□□ 0.4
KCNA3P22001 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KCNA3P22001 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
KCNA3P22001 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KCNA3P22001 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KCNA3P22001 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
KCNA3P22001 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
KCNA3P22001 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC17.54■□□□□ 0.4
KCNA3P22001 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
KCNA3P22001 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
KCNA3P22001 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
KCNA3P22001 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
KCNA3P22001 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KCNA3P22001 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
KCNA3P22001 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.54■□□□□ 0.4
KCNA3P22001 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.54■□□□□ 0.4
KCNA3P22001 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KCNA3P22001 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
KCNA3P22001 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
KCNA3P22001 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
KCNA3P22001 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
KCNA3P22001 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.54■□□□□ 0.4
KCNA3P22001 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KCNA3P22001 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KCNA3P22001 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.54■□□□□ 0.4
KCNA3P22001 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KCNA3P22001 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KCNA3P22001 HHLA3-202ENST00000361764 692 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
KCNA3P22001 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
KCNA3P22001 KRT8P30-201ENST00000432100 650 ntBASIC17.54■□□□□ 0.4
KCNA3P22001 NRADDP-201ENST00000437305 691 ntBASIC17.54■□□□□ 0.4
KCNA3P22001 GOLGA6L16P-201ENST00000441780 1299 ntBASIC17.54■□□□□ 0.4
KCNA3P22001 AC100858.1-201ENST00000514059 1228 ntBASIC17.54■□□□□ 0.4
KCNA3P22001 CTBP2P6-201ENST00000526402 1229 ntBASIC17.54■□□□□ 0.4
KCNA3P22001 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC17.54■□□□□ 0.4
KCNA3P22001 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC17.54■□□□□ 0.4
KCNA3P22001 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC17.54■□□□□ 0.4
KCNA3P22001 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
KCNA3P22001 GGNBP1-204ENST00000613113 887 ntBASIC17.54■□□□□ 0.4
KCNA3P22001 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
KCNA3P22001 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
KCNA3P22001 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
KCNA3P22001 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
KCNA3P22001 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KCNA3P22001 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
KCNA3P22001 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KCNA3P22001 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
KCNA3P22001 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
KCNA3P22001 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
KCNA3P22001 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
KCNA3P22001 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KCNA3P22001 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC17.54■□□□□ 0.4
KCNA3P22001 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KCNA3P22001 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KCNA3P22001 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC17.54■□□□□ 0.4
KCNA3P22001 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
KCNA3P22001 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
KCNA3P22001 ARRB2-218ENST00000575877 1579 ntTSL 5 BASIC17.53■□□□□ 0.4
KCNA3P22001 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
KCNA3P22001 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KCNA3P22001 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
KCNA3P22001 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
KCNA3P22001 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KCNA3P22001 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
KCNA3P22001 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KCNA3P22001 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
KCNA3P22001 AC022080.1-201ENST00000366255 781 ntBASIC17.53■□□□□ 0.4
KCNA3P22001 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC17.53■□□□□ 0.4
KCNA3P22001 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KCNA3P22001 KRT18P62-201ENST00000446618 1287 ntBASIC17.53■□□□□ 0.4
KCNA3P22001 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC17.53■□□□□ 0.4
KCNA3P22001 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC17.53■□□□□ 0.4
KCNA3P22001 MIR2278-201ENST00000516344 96 ntBASIC17.53■□□□□ 0.4
KCNA3P22001 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
KCNA3P22001 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC17.53■□□□□ 0.4
KCNA3P22001 RN7SL602P-201ENST00000578326 324 ntBASIC17.53■□□□□ 0.4
KCNA3P22001 RN7SL718P-201ENST00000581254 303 ntBASIC17.53■□□□□ 0.4
KCNA3P22001 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC17.53■□□□□ 0.4
KCNA3P22001 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC17.53■□□□□ 0.4
KCNA3P22001 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC17.53■□□□□ 0.4
KCNA3P22001 AC080013.5-201ENST00000607044 679 ntBASIC17.53■□□□□ 0.4
KCNA3P22001 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
KCNA3P22001 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
KCNA3P22001 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC17.53■□□□□ 0.4
KCNA3P22001 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
KCNA3P22001 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
KCNA3P22001 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC17.53■□□□□ 0.4
KCNA3P22001 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KCNA3P22001 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
KCNA3P22001 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC17.53■□□□□ 0.4
KCNA3P22001 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC17.53■□□□□ 0.4
KCNA3P22001 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
KCNA3P22001 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
KCNA3P22001 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC17.53■□□□□ 0.4
KCNA3P22001 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KCNA3P22001 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms