Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
RAB4AP20338 COBLL1-202ENST00000375458 9367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
RAB4AP20338 SGK1-220ENST00000524929 2594 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
RAB4AP20338 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
RAB4AP20338 ACVRL1-206ENST00000550683 4121 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
RAB4AP20338 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
RAB4AP20338 COL12A1-202ENST00000345356 5886 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
RAB4AP20338 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
RAB4AP20338 INPP5J-208ENST00000412277 3512 ntTSL 2 BASIC11.29□□□□□ -0.6
RAB4AP20338 OXR1-202ENST00000312046 4406 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RAB4AP20338 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RAB4AP20338 TGM7-201ENST00000452443 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RAB4AP20338 IP6K1-202ENST00000395238 4117 ntTSL 3 BASIC11.29□□□□□ -0.6
RAB4AP20338 GOLGA6L2-202ENST00000345070 1972 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
RAB4AP20338 NCAM1-225ENST00000618266 5937 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
RAB4AP20338 SETD7-201ENST00000274031 7365 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RAB4AP20338 NRXN1-233ENST00000630543 4500 ntTSL 5 BASIC11.29□□□□□ -0.6
RAB4AP20338 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RAB4AP20338 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
RAB4AP20338 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RAB4AP20338 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RAB4AP20338 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RAB4AP20338 METTL26-205ENST00000397666 726 ntTSL 2 BASIC11.29□□□□□ -0.6
RAB4AP20338 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
RAB4AP20338 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
RAB4AP20338 TSPY19P-201ENST00000418461 509 ntBASIC11.29□□□□□ -0.6
RAB4AP20338 AC140658.5-201ENST00000438532 169 ntBASIC11.29□□□□□ -0.6
RAB4AP20338 TSPY18P-201ENST00000441642 509 ntBASIC11.29□□□□□ -0.6
RAB4AP20338 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RAB4AP20338 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
RAB4AP20338 HNRNPUP1-201ENST00000554987 333 ntBASIC11.29□□□□□ -0.6
RAB4AP20338 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
RAB4AP20338 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC11.29□□□□□ -0.6
RAB4AP20338 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC11.29□□□□□ -0.6
RAB4AP20338 COQ9-214ENST00000567933 882 ntTSL 3 BASIC11.29□□□□□ -0.6
RAB4AP20338 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RAB4AP20338 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
RAB4AP20338 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC11.29□□□□□ -0.6
RAB4AP20338 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
RAB4AP20338 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC11.29□□□□□ -0.6
RAB4AP20338 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC11.29□□□□□ -0.6
RAB4AP20338 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC11.29□□□□□ -0.6
RAB4AP20338 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC11.29□□□□□ -0.6
RAB4AP20338 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
RAB4AP20338 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC11.29□□□□□ -0.6
RAB4AP20338 NUTM2A-AS1-208ENST00000446751 2394 ntTSL 2 BASIC11.29□□□□□ -0.6
RAB4AP20338 MED24-204ENST00000394128 3479 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RAB4AP20338 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC11.29□□□□□ -0.6
RAB4AP20338 BCL2L11-217ENST00000610735 5120 ntTSL 5 BASIC11.29□□□□□ -0.6
RAB4AP20338 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RAB4AP20338 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC11.29□□□□□ -0.6
RAB4AP20338 TSC22D1-203ENST00000458659 4820 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
RAB4AP20338 TAX1BP1-207ENST00000433216 3174 ntTSL 2 BASIC11.29□□□□□ -0.6
RAB4AP20338 GPR12-202ENST00000405846 4850 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RAB4AP20338 SLC26A2-201ENST00000286298 8080 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RAB4AP20338 GRIN2A-206ENST00000562109 4338 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
RAB4AP20338 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RAB4AP20338 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
RAB4AP20338 DRC7-202ENST00000360716 3041 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
RAB4AP20338 ATP13A2-203ENST00000452699 3981 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
RAB4AP20338 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RAB4AP20338 GBP1P1-201ENST00000394662 1740 ntBASIC11.29□□□□□ -0.6
RAB4AP20338 GPD1-201ENST00000301149 3082 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RAB4AP20338 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
RAB4AP20338 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
RAB4AP20338 WDR62-203ENST00000401500 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
RAB4AP20338 TNK1-201ENST00000570896 3122 ntAPPRIS P3 TSL 5 BASIC11.29□□□□□ -0.6
RAB4AP20338 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
RAB4AP20338 OFD1-203ENST00000380567 3736 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
RAB4AP20338 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
RAB4AP20338 CCDC14-220ENST00000488653 4156 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
RAB4AP20338 KIAA0513-206ENST00000566428 7772 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RAB4AP20338 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RAB4AP20338 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
RAB4AP20338 AC008806.1-201ENST00000624962 2443 ntBASIC11.28□□□□□ -0.6
RAB4AP20338 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC11.28□□□□□ -0.6
RAB4AP20338 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
RAB4AP20338 ABCA8-208ENST00000586539 5088 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
RAB4AP20338 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RAB4AP20338 TBL1X-202ENST00000380961 4674 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RAB4AP20338 CACNA1C-213ENST00000399629 6562 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
RAB4AP20338 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC11.28□□□□□ -0.6
RAB4AP20338 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
RAB4AP20338 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
RAB4AP20338 CCDC148-201ENST00000283233 3122 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
RAB4AP20338 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC11.28□□□□□ -0.6
RAB4AP20338 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
RAB4AP20338 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC11.28□□□□□ -0.6
RAB4AP20338 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
RAB4AP20338 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
RAB4AP20338 CENPM-204ENST00000402420 688 ntTSL 5 BASIC11.28□□□□□ -0.6
RAB4AP20338 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
RAB4AP20338 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
RAB4AP20338 GHSR-202ENST00000427970 912 ntBASIC11.28□□□□□ -0.6
RAB4AP20338 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC11.28□□□□□ -0.6
RAB4AP20338 NMU-203ENST00000507338 658 ntTSL 3 BASIC11.28□□□□□ -0.6
RAB4AP20338 RNPS1P1-201ENST00000507437 918 ntBASIC11.28□□□□□ -0.6
RAB4AP20338 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC11.28□□□□□ -0.6
RAB4AP20338 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC11.28□□□□□ -0.6
RAB4AP20338 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC11.28□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms