Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
NCK1P16333 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.89□□□□□ -0.19
NCK1P16333 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NCK1P16333 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NCK1P16333 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NCK1P16333 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
NCK1P16333 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC13.89□□□□□ -0.19
NCK1P16333 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NCK1P16333 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
NCK1P16333 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NCK1P16333 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
NCK1P16333 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC13.88□□□□□ -0.19
NCK1P16333 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NCK1P16333 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NCK1P16333 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
NCK1P16333 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC13.88□□□□□ -0.19
NCK1P16333 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
NCK1P16333 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC13.88□□□□□ -0.19
NCK1P16333 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NCK1P16333 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
NCK1P16333 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NCK1P16333 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
NCK1P16333 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC13.88□□□□□ -0.19
NCK1P16333 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC13.88□□□□□ -0.19
NCK1P16333 AC005014.1-201ENST00000432006 2976 ntBASIC13.88□□□□□ -0.19
NCK1P16333 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC13.88□□□□□ -0.19
NCK1P16333 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC13.88□□□□□ -0.19
NCK1P16333 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
NCK1P16333 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NCK1P16333 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC13.88□□□□□ -0.19
NCK1P16333 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
NCK1P16333 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NCK1P16333 KRT18P13-201ENST00000400056 1290 ntBASIC13.88□□□□□ -0.19
NCK1P16333 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC13.88□□□□□ -0.19
NCK1P16333 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC13.88□□□□□ -0.19
NCK1P16333 BX842568.4-201ENST00000421222 227 ntBASIC13.88□□□□□ -0.19
NCK1P16333 TREML5P-201ENST00000421694 576 ntBASIC13.88□□□□□ -0.19
NCK1P16333 AC107890.1-201ENST00000422478 521 ntBASIC13.88□□□□□ -0.19
NCK1P16333 EIF3FP3-201ENST00000434851 1086 ntBASIC13.88□□□□□ -0.19
NCK1P16333 AP001582.1-201ENST00000525856 295 ntBASIC13.88□□□□□ -0.19
NCK1P16333 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC13.88□□□□□ -0.19
NCK1P16333 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.88□□□□□ -0.19
NCK1P16333 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC13.88□□□□□ -0.19
NCK1P16333 AC140878.1-201ENST00000565277 250 ntBASIC13.88□□□□□ -0.19
NCK1P16333 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC13.88□□□□□ -0.19
NCK1P16333 AC009407.1-201ENST00000568958 598 ntBASIC13.88□□□□□ -0.19
NCK1P16333 ARL16-202ENST00000570561 768 ntTSL 2 BASIC13.88□□□□□ -0.19
NCK1P16333 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.88□□□□□ -0.19
NCK1P16333 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
NCK1P16333 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
NCK1P16333 AC004466.1-201ENST00000599515 1080 ntBASIC13.88□□□□□ -0.19
NCK1P16333 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NCK1P16333 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NCK1P16333 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
NCK1P16333 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
NCK1P16333 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC13.88□□□□□ -0.19
NCK1P16333 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NCK1P16333 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NCK1P16333 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NCK1P16333 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
NCK1P16333 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
NCK1P16333 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.88□□□□□ -0.19
NCK1P16333 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NCK1P16333 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NCK1P16333 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NCK1P16333 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NCK1P16333 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NCK1P16333 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NCK1P16333 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
NCK1P16333 KRT8P35-201ENST00000483942 1338 ntBASIC13.88□□□□□ -0.19
NCK1P16333 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NCK1P16333 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC13.88□□□□□ -0.19
NCK1P16333 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
NCK1P16333 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NCK1P16333 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC13.87□□□□□ -0.19
NCK1P16333 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC13.87□□□□□ -0.19
NCK1P16333 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
NCK1P16333 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC13.87□□□□□ -0.19
NCK1P16333 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
NCK1P16333 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NCK1P16333 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NCK1P16333 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NCK1P16333 GOLGA8IP-202ENST00000611635 2100 ntBASIC13.87□□□□□ -0.19
NCK1P16333 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
NCK1P16333 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
NCK1P16333 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NCK1P16333 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NCK1P16333 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NCK1P16333 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
NCK1P16333 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NCK1P16333 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
NCK1P16333 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
NCK1P16333 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC13.87□□□□□ -0.19
NCK1P16333 TLE1P1-201ENST00000422965 589 ntBASIC13.87□□□□□ -0.19
NCK1P16333 TSEN15P1-201ENST00000423257 515 ntBASIC13.87□□□□□ -0.19
NCK1P16333 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC13.87□□□□□ -0.19
NCK1P16333 RN7SL399P-201ENST00000471648 279 ntBASIC13.87□□□□□ -0.19
NCK1P16333 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC13.87□□□□□ -0.19
NCK1P16333 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC13.87□□□□□ -0.19
NCK1P16333 AC131206.1-201ENST00000538078 1211 ntBASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms