Protein–RNA interactions for Protein: P13500

CCL2, C-C motif chemokine 2, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2P13500 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC12.8□□□□□ -0.36
CCL2P13500 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCL2P13500 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC12.79□□□□□ -0.36
CCL2P13500 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCL2P13500 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCL2P13500 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCL2P13500 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCL2P13500 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
CCL2P13500 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CCL2P13500 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCL2P13500 R3HDM2P2-201ENST00000401880 2116 ntBASIC12.79□□□□□ -0.36
CCL2P13500 MYADML-201ENST00000474610 2147 ntBASIC12.79□□□□□ -0.36
CCL2P13500 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC12.79□□□□□ -0.36
CCL2P13500 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
CCL2P13500 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCL2P13500 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCL2P13500 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
CCL2P13500 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCL2P13500 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC12.79□□□□□ -0.36
CCL2P13500 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CCL2P13500 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCL2P13500 ABR-228ENST00000574437 3196 ntTSL 5 BASIC12.79□□□□□ -0.36
CCL2P13500 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCL2P13500 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCL2P13500 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CCL2P13500 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCL2P13500 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CCL2P13500 Z93015.1-201ENST00000451718 390 ntBASIC12.79□□□□□ -0.36
CCL2P13500 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CCL2P13500 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CCL2P13500 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC12.79□□□□□ -0.36
CCL2P13500 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC12.79□□□□□ -0.36
CCL2P13500 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCL2P13500 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC12.79□□□□□ -0.36
CCL2P13500 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
CCL2P13500 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CCL2P13500 TECR-220ENST00000600083 1204 ntTSL 2 BASIC12.79□□□□□ -0.36
CCL2P13500 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC12.79□□□□□ -0.36
CCL2P13500 AL033527.4-201ENST00000641026 673 ntBASIC12.79□□□□□ -0.36
CCL2P13500 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCL2P13500 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC12.79□□□□□ -0.36
CCL2P13500 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCL2P13500 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC12.79□□□□□ -0.36
CCL2P13500 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC12.79□□□□□ -0.36
CCL2P13500 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCL2P13500 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC12.79□□□□□ -0.36
CCL2P13500 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
CCL2P13500 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCL2P13500 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCL2P13500 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
CCL2P13500 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
CCL2P13500 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC12.79□□□□□ -0.36
CCL2P13500 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCL2P13500 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCL2P13500 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC12.79□□□□□ -0.36
CCL2P13500 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCL2P13500 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCL2P13500 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC12.78□□□□□ -0.36
CCL2P13500 AC015818.8-201ENST00000587907 1519 ntBASIC12.78□□□□□ -0.36
CCL2P13500 REXO1L6P-201ENST00000603433 1515 ntBASIC12.78□□□□□ -0.36
CCL2P13500 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCL2P13500 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
CCL2P13500 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
CCL2P13500 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCL2P13500 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CCL2P13500 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
CCL2P13500 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
CCL2P13500 MVK-214ENST00000629016 1591 ntTSL 5 BASIC12.78□□□□□ -0.36
CCL2P13500 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC12.78□□□□□ -0.36
CCL2P13500 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCL2P13500 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCL2P13500 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC12.78□□□□□ -0.36
CCL2P13500 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC12.78□□□□□ -0.36
CCL2P13500 AMT-204ENST00000427987 1646 ntTSL 5 BASIC12.78□□□□□ -0.36
CCL2P13500 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CCL2P13500 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC12.78□□□□□ -0.36
CCL2P13500 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC12.78□□□□□ -0.36
CCL2P13500 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CCL2P13500 AC079178.1-201ENST00000420915 656 ntBASIC12.78□□□□□ -0.36
CCL2P13500 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CCL2P13500 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
CCL2P13500 MTX1P1-201ENST00000440904 838 ntBASIC12.78□□□□□ -0.36
CCL2P13500 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC12.78□□□□□ -0.36
CCL2P13500 TPT1P11-201ENST00000458482 498 ntBASIC12.78□□□□□ -0.36
CCL2P13500 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC12.78□□□□□ -0.36
CCL2P13500 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCL2P13500 RPSAP36-202ENST00000494591 1261 ntBASIC12.78□□□□□ -0.36
CCL2P13500 ALG3P1-201ENST00000508806 1114 ntBASIC12.78□□□□□ -0.36
CCL2P13500 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC12.78□□□□□ -0.36
CCL2P13500 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC12.78□□□□□ -0.36
CCL2P13500 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CCL2P13500 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC12.78□□□□□ -0.36
CCL2P13500 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC12.78□□□□□ -0.36
CCL2P13500 AC103988.2-201ENST00000561804 725 ntBASIC12.78□□□□□ -0.36
CCL2P13500 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC12.78□□□□□ -0.36
CCL2P13500 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC12.78□□□□□ -0.36
CCL2P13500 AC244157.2-201ENST00000616239 1006 ntBASIC12.78□□□□□ -0.36
CCL2P13500 AC027601.3-201ENST00000622907 509 ntBASIC12.78□□□□□ -0.36
CCL2P13500 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CCL2P13500 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms