Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CYP3A4P08684 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CYP3A4P08684 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CYP3A4P08684 USP4-203ENST00000415188 1454 ntTSL 3 BASIC16.29■□□□□ 0.2
CYP3A4P08684 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CYP3A4P08684 AC007952.5-201ENST00000572818 1486 ntBASIC16.29■□□□□ 0.2
CYP3A4P08684 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CYP3A4P08684 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CYP3A4P08684 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CYP3A4P08684 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CYP3A4P08684 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CYP3A4P08684 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC16.29■□□□□ 0.2
CYP3A4P08684 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CYP3A4P08684 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CYP3A4P08684 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CYP3A4P08684 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CYP3A4P08684 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC16.29■□□□□ 0.2
CYP3A4P08684 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CYP3A4P08684 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CYP3A4P08684 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CYP3A4P08684 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CYP3A4P08684 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CYP3A4P08684 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CYP3A4P08684 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CYP3A4P08684 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC16.29■□□□□ 0.2
CYP3A4P08684 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC16.29■□□□□ 0.2
CYP3A4P08684 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CYP3A4P08684 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC16.29■□□□□ 0.2
CYP3A4P08684 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC16.29■□□□□ 0.2
CYP3A4P08684 AC245884.6-201ENST00000515672 1067 ntBASIC16.29■□□□□ 0.2
CYP3A4P08684 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC16.29■□□□□ 0.2
CYP3A4P08684 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC16.29■□□□□ 0.2
CYP3A4P08684 PHBP15-201ENST00000574228 665 ntBASIC16.29■□□□□ 0.2
CYP3A4P08684 ARL16-210ENST00000574938 751 ntTSL 2 BASIC16.29■□□□□ 0.2
CYP3A4P08684 IRF3-215ENST00000596822 823 ntTSL 3 BASIC16.29■□□□□ 0.2
CYP3A4P08684 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CYP3A4P08684 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC16.29■□□□□ 0.2
CYP3A4P08684 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CYP3A4P08684 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
CYP3A4P08684 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CYP3A4P08684 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CYP3A4P08684 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CYP3A4P08684 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CYP3A4P08684 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC16.28■□□□□ 0.2
CYP3A4P08684 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CYP3A4P08684 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CYP3A4P08684 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CYP3A4P08684 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CYP3A4P08684 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CYP3A4P08684 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CYP3A4P08684 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC16.28■□□□□ 0.2
CYP3A4P08684 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CYP3A4P08684 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CYP3A4P08684 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CYP3A4P08684 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CYP3A4P08684 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC16.28■□□□□ 0.2
CYP3A4P08684 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
CYP3A4P08684 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CYP3A4P08684 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC16.28■□□□□ 0.2
CYP3A4P08684 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CYP3A4P08684 MBP-201ENST00000354542 575 ntTSL 2 BASIC16.28■□□□□ 0.2
CYP3A4P08684 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC16.28■□□□□ 0.2
CYP3A4P08684 BANF1P3-201ENST00000412556 261 ntBASIC16.28■□□□□ 0.2
CYP3A4P08684 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CYP3A4P08684 RPS9P1-201ENST00000419943 583 ntBASIC16.28■□□□□ 0.2
CYP3A4P08684 DUX4L50-201ENST00000455245 715 ntBASIC16.28■□□□□ 0.2
CYP3A4P08684 KRT18P15-201ENST00000458108 1291 ntBASIC16.28■□□□□ 0.2
CYP3A4P08684 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CYP3A4P08684 SUPT4H1P2-201ENST00000501248 353 ntBASIC16.28■□□□□ 0.2
CYP3A4P08684 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CYP3A4P08684 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC16.28■□□□□ 0.2
CYP3A4P08684 STUB1-204ENST00000564370 875 ntTSL 2 BASIC16.28■□□□□ 0.2
CYP3A4P08684 AC026803.1-201ENST00000569130 274 ntBASIC16.28■□□□□ 0.2
CYP3A4P08684 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC16.28■□□□□ 0.2
CYP3A4P08684 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CYP3A4P08684 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC16.28■□□□□ 0.2
CYP3A4P08684 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CYP3A4P08684 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CYP3A4P08684 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CYP3A4P08684 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CYP3A4P08684 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CYP3A4P08684 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CYP3A4P08684 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
CYP3A4P08684 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CYP3A4P08684 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CYP3A4P08684 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CYP3A4P08684 AC152010.1-201ENST00000415779 2006 ntBASIC16.28■□□□□ 0.2
CYP3A4P08684 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CYP3A4P08684 LINC01815-202ENST00000641468 1409 ntBASIC16.28■□□□□ 0.2
CYP3A4P08684 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CYP3A4P08684 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CYP3A4P08684 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CYP3A4P08684 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.2
CYP3A4P08684 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
CYP3A4P08684 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.27■□□□□ 0.2
CYP3A4P08684 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CYP3A4P08684 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CYP3A4P08684 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
CYP3A4P08684 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CYP3A4P08684 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms