Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC14.5□□□□□ -0.09
CAPN1P07384 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CAPN1P07384 MIR6869-201ENST00000619434 62 ntBASIC14.5□□□□□ -0.09
CAPN1P07384 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
CAPN1P07384 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CAPN1P07384 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CAPN1P07384 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC14.5□□□□□ -0.09
CAPN1P07384 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
CAPN1P07384 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC14.5□□□□□ -0.09
CAPN1P07384 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC14.5□□□□□ -0.09
CAPN1P07384 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CAPN1P07384 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CAPN1P07384 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CAPN1P07384 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.5□□□□□ -0.09
CAPN1P07384 LRRC59-203ENST00000576448 1531 ntBASIC14.5□□□□□ -0.09
CAPN1P07384 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CAPN1P07384 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CAPN1P07384 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CAPN1P07384 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
CAPN1P07384 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CAPN1P07384 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CAPN1P07384 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CAPN1P07384 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CAPN1P07384 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CAPN1P07384 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CAPN1P07384 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CAPN1P07384 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CAPN1P07384 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CAPN1P07384 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CAPN1P07384 KRT8P35-201ENST00000483942 1338 ntBASIC14.49□□□□□ -0.09
CAPN1P07384 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CAPN1P07384 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.49□□□□□ -0.09
CAPN1P07384 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CAPN1P07384 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CAPN1P07384 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC14.49□□□□□ -0.09
CAPN1P07384 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CAPN1P07384 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CAPN1P07384 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CAPN1P07384 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC14.49□□□□□ -0.09
CAPN1P07384 FAM197Y7-201ENST00000432892 766 ntBASIC14.49□□□□□ -0.09
CAPN1P07384 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC14.49□□□□□ -0.09
CAPN1P07384 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC14.49□□□□□ -0.09
CAPN1P07384 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC14.49□□□□□ -0.09
CAPN1P07384 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
CAPN1P07384 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
CAPN1P07384 AC078819.1-201ENST00000547454 765 ntBASIC14.49□□□□□ -0.09
CAPN1P07384 AC012085.1-201ENST00000548270 765 ntBASIC14.49□□□□□ -0.09
CAPN1P07384 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC14.49□□□□□ -0.09
CAPN1P07384 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CAPN1P07384 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
CAPN1P07384 AC132938.4-201ENST00000623835 848 ntBASIC14.49□□□□□ -0.09
CAPN1P07384 AL603764.1-201ENST00000636452 321 ntBASIC14.49□□□□□ -0.09
CAPN1P07384 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC14.49□□□□□ -0.09
CAPN1P07384 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
CAPN1P07384 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.49□□□□□ -0.09
CAPN1P07384 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CAPN1P07384 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CAPN1P07384 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
CAPN1P07384 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CAPN1P07384 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CAPN1P07384 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CAPN1P07384 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CAPN1P07384 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CAPN1P07384 SALL4P5-201ENST00000419001 1760 ntBASIC14.49□□□□□ -0.09
CAPN1P07384 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CAPN1P07384 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
CAPN1P07384 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CAPN1P07384 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CAPN1P07384 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CAPN1P07384 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CAPN1P07384 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC14.49□□□□□ -0.09
CAPN1P07384 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CAPN1P07384 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
CAPN1P07384 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CAPN1P07384 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
CAPN1P07384 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CAPN1P07384 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC14.48□□□□□ -0.09
CAPN1P07384 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CAPN1P07384 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.48□□□□□ -0.09
CAPN1P07384 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
CAPN1P07384 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
CAPN1P07384 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CAPN1P07384 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CAPN1P07384 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CAPN1P07384 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC14.48□□□□□ -0.09
CAPN1P07384 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CAPN1P07384 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CAPN1P07384 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CAPN1P07384 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.48□□□□□ -0.09
CAPN1P07384 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC14.48□□□□□ -0.09
CAPN1P07384 GUK1-206ENST00000366723 845 ntTSL 5 BASIC14.48□□□□□ -0.09
CAPN1P07384 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CAPN1P07384 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CAPN1P07384 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC14.48□□□□□ -0.09
CAPN1P07384 ACTBP8-201ENST00000403258 1108 ntBASIC14.48□□□□□ -0.09
CAPN1P07384 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC14.48□□□□□ -0.09
CAPN1P07384 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.48□□□□□ -0.09
CAPN1P07384 YBX1P6-201ENST00000442962 1002 ntBASIC14.48□□□□□ -0.09
CAPN1P07384 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CAPN1P07384 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms