Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
HLA-DQB2P05538 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.8□□□□□ -0.04
HLA-DQB2P05538 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DQB2P05538 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DQB2P05538 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
HLA-DQB2P05538 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DQB2P05538 MIR663B-201ENST00000408361 115 ntBASIC14.8□□□□□ -0.04
HLA-DQB2P05538 RPS2P32-201ENST00000439199 892 ntBASIC14.8□□□□□ -0.04
HLA-DQB2P05538 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
HLA-DQB2P05538 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DQB2P05538 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC14.8□□□□□ -0.04
HLA-DQB2P05538 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DQB2P05538 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC14.8□□□□□ -0.04
HLA-DQB2P05538 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC14.8□□□□□ -0.04
HLA-DQB2P05538 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC14.8□□□□□ -0.04
HLA-DQB2P05538 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC14.8□□□□□ -0.04
HLA-DQB2P05538 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC14.8□□□□□ -0.04
HLA-DQB2P05538 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC14.8□□□□□ -0.04
HLA-DQB2P05538 AL359881.2-201ENST00000602973 570 ntBASIC14.8□□□□□ -0.04
HLA-DQB2P05538 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DQB2P05538 AL033527.4-201ENST00000641026 673 ntBASIC14.8□□□□□ -0.04
HLA-DQB2P05538 TUBB1P2-201ENST00000422712 1306 ntBASIC14.8□□□□□ -0.04
HLA-DQB2P05538 TUBB1P1-201ENST00000503144 1300 ntBASIC14.8□□□□□ -0.04
HLA-DQB2P05538 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC14.8□□□□□ -0.04
HLA-DQB2P05538 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DQB2P05538 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DQB2P05538 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DQB2P05538 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC14.8□□□□□ -0.04
HLA-DQB2P05538 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DQB2P05538 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.8□□□□□ -0.04
HLA-DQB2P05538 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DQB2P05538 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC14.8□□□□□ -0.04
HLA-DQB2P05538 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC14.8□□□□□ -0.04
HLA-DQB2P05538 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
HLA-DQB2P05538 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DQB2P05538 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
HLA-DQB2P05538 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
HLA-DQB2P05538 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DQB2P05538 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DQB2P05538 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.79□□□□□ -0.04
HLA-DQB2P05538 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
HLA-DQB2P05538 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DQB2P05538 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DQB2P05538 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DQB2P05538 AC097376.2-205ENST00000610159 5334 ntBASIC14.79□□□□□ -0.04
HLA-DQB2P05538 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
HLA-DQB2P05538 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DQB2P05538 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.79□□□□□ -0.04
HLA-DQB2P05538 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.79□□□□□ -0.04
HLA-DQB2P05538 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DQB2P05538 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DQB2P05538 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
HLA-DQB2P05538 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC14.79□□□□□ -0.04
HLA-DQB2P05538 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DQB2P05538 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC14.79□□□□□ -0.04
HLA-DQB2P05538 HNRNPA1P63-201ENST00000427917 963 ntBASIC14.79□□□□□ -0.04
HLA-DQB2P05538 AC012441.2-201ENST00000444843 739 ntBASIC14.79□□□□□ -0.04
HLA-DQB2P05538 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC14.79□□□□□ -0.04
HLA-DQB2P05538 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DQB2P05538 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC14.79□□□□□ -0.04
HLA-DQB2P05538 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC14.79□□□□□ -0.04
HLA-DQB2P05538 USB1-203ENST00000539737 1212 ntTSL 2 BASIC14.79□□□□□ -0.04
HLA-DQB2P05538 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DQB2P05538 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC14.79□□□□□ -0.04
HLA-DQB2P05538 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC14.79□□□□□ -0.04
HLA-DQB2P05538 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC14.79□□□□□ -0.04
HLA-DQB2P05538 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC14.79□□□□□ -0.04
HLA-DQB2P05538 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC14.79□□□□□ -0.04
HLA-DQB2P05538 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC14.79□□□□□ -0.04
HLA-DQB2P05538 AC104506.1-201ENST00000609247 429 ntBASIC14.79□□□□□ -0.04
HLA-DQB2P05538 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
HLA-DQB2P05538 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC14.79□□□□□ -0.04
HLA-DQB2P05538 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.79□□□□□ -0.04
HLA-DQB2P05538 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC14.79□□□□□ -0.04
HLA-DQB2P05538 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DQB2P05538 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
HLA-DQB2P05538 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DQB2P05538 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC14.79□□□□□ -0.04
HLA-DQB2P05538 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
HLA-DQB2P05538 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
HLA-DQB2P05538 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DQB2P05538 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
HLA-DQB2P05538 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DQB2P05538 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DQB2P05538 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
HLA-DQB2P05538 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
HLA-DQB2P05538 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
HLA-DQB2P05538 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DQB2P05538 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.79□□□□□ -0.04
HLA-DQB2P05538 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.79□□□□□ -0.04
HLA-DQB2P05538 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
HLA-DQB2P05538 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC14.79□□□□□ -0.04
HLA-DQB2P05538 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DQB2P05538 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
HLA-DQB2P05538 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HLA-DQB2P05538 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.78□□□□□ -0.04
HLA-DQB2P05538 MBLAC2-202ENST00000514906 1936 ntBASIC14.78□□□□□ -0.04
HLA-DQB2P05538 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.78□□□□□ -0.04
HLA-DQB2P05538 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
HLA-DQB2P05538 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms